Detail Information

Basic Information:


  VIRBase ID:  

VHID00050415

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 FAM86C2P
miRBase
Accession/Entrez ID		 zikv-mir-5 645332
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FAM86C2P
chr11:67563245(-) A-I      intronic
chr11:67563261(-) A-I      intronic
chr11:67561276(-) A-I      intronic
chr11:67561223(-) A-I      intronic
chr11:67567859(-) A-I      intronic
chr11:67563086(-) A-I      intronic
chr11:67561325(-) A-I      intronic
chr11:67567867(-) A-I      intronic
chr11:67561231(-) A-I      intronic
chr11:67567865(-) A-I      intronic
chr11:67562603(-) A-I      intronic
chr11:67561206(-) A-I      intronic
chr11:67561939(-) A-I      intronic
chr11:67562999(-) A-I      intronic
chr11:67567986(-) A-I      intronic
chr11:67562687(-) A-I      intronic
chr11:67562670(-) A-I      intronic
chr11:67563193(-) A-I      intronic
chr11:67562850(-) A-I      intronic
chr11:67566105(-) A-I      intronic
chr11:67562705(-) A-I      intronic
chr11:67567926(-) A-I      intronic
chr11:67563029(-) A-I      intronic
chr11:67563253(-) A-I      intronic
chr11:67561216(-) A-I      intronic
chr11:67562718(-) A-I      intronic
chr11:67563176(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FAM86C2P
chr11:67570492(-) T-G exon 3'UTR    21725310

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FAM86C2P
chr11:67559143-67559144(-) m6A exon       24981863//27773535
chr11:67559170-67559171(-) m6A exon       24981863//27773535
chr11:67559178-67559179(-) m6A exon       24981863//27773535
chr11:67559255-67559256(-) m6A exon       24981863//27773535
chr11:67559316-67559317(-) m6A exon       24981863
chr11:67559541-67559542(-) m6A exon       24284625//24209618//25456834//24981863//27773535//22608085
chr11:67559548-67559549(-) m6A exon       24284625//24209618//25456834//24981863//27773535//22608085
chr11:67559579-67559580(-) m6A exon       24284625//24209618//25456834//24981863//27773535//22608085
chr11:67559722-67559723(-) m6A exon       25456834//24981863
chr11:67559847-67559848(-) m6A exon       24284625//24209618//25456834//24981863//22608085
chr11:67559872-67559873(-) m6A exon       24284625//24209618//25456834//24981863//22608085
chr11:67559957-67559958(-) m6A exon       24284625//24981863//27773535//22608085
chr11:67560032-67560033(-) m6A exon       24284625//24209618//24981863//27773535//22608085
chr11:67560068-67560069(-) m6A exon       24284625//24209618//24981863//27773535//22608085
chr11:67560143-67560144(-) m6A exon       24284625//24981863//27773535//22608085
chr11:67560164-67560165(-) m6A exon       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr11:67560246-67560247(-) m6A exon       24284625//25456834//24981863//27773535//27371828//22608085
chr11:67560298-67560299(-) m6A exon       24284625//25456834//24981863//27773535//22608085
chr11:67560350-67560351(-) m6A exon       24284625//25456834//24981863//27773535//22608085
chr11:67560434-67560435(-) m6A exon       24284625//24981863//27773535//22608085
chr11:67560510-67560511(-) m6A exon       24284625//24981863//27773535//22608085
chr11:67560526-67560527(-) m6A exon       24284625//24981863//27773535//22608085
chr11:67560533-67560534(-) m6A exon       24284625//24981863//27773535//22608085
chr11:67560571-67560572(-) m6A exon       24284625//24981863//27773535//22608085
chr11:67560582-67560583(-) m6A exon       24284625//24981863//22608085
chr11:67560661-67560662(-) m6A exon       24284625//24981863//22608085
chr11:67560676-67560677(-) m6A exon       24284625//24981863//22608085
chr11:67560717-67560718(-) m6A exon       24284625//24981863//22608085
chr11:67560735-67560736(-) m6A exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FAM86C2P
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: FAM86C2P

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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