Detail Information

Basic Information:


  VIRBase ID:  

VHID00050398

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 HERC2P9
miRBase
Accession/Entrez ID		 zikv-mir-5 440248
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - -

RNA Editing:


Resource Symbol Editing Position
Lncediting HERC2P9
    chr15: 28863366
    chr15: 28863388
Resource Symbol Editing Position Change Genetic Region
RADAR HERC2P9
chr15:28920929(+) A-I      intronic
chr15:28923723(+) A-I      intronic
chr15:28920848(+) A-I      intronic
chr15:28920915(+) A-I      intronic
chr15:28920891(+) A-I      intronic
chr15:28921047(+) A-I      intronic
chr15:28921062(+) A-I      intronic
chr15:28923963(+) A-I      intronic
chr15:28919933(+) A-I      intronic
chr15:28920880(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED HERC2P9
chr15:28920880(+) A-I intron -    22327324

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase HERC2P9
chr15:28927243-28927244(+) m6A exon//intron       24981863
chr15:28927264-28927265(+) m6A exon//intron       24981863
chr15:28929277-28929278(+) m6A exon       24981863
chr15:28929597-28929598(+) m6A exon       24284625//24981863
chr15:28929620-28929621(+) m6A exon       24284625//25456834//24981863//22608085
chr15:28929678-28929679(+) m6A exon       24284625//24209618//25456834//24981863//22608085
chr15:28929721-28929722(+) m6A exon       24284625//24209618//25456834//24981863//27773535//22608085
chr15:28929789-28929790(+) m6A exon       24284625//24209618//24981863//27773535//22608085
chr15:28929851-28929852(+) m6A exon       24284625//24981863//22608085
chr15:28929905-28929906(+) m6A exon       24981863//22608085
chr15:28929921-28929922(+) m6A exon       24981863//22608085
chr15:28929965-28929966(+) m6A exon       24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate HERC2P9
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: HERC2P9

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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