Detail Information

Basic Information:


  VIRBase ID:  

VHID00050374

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 CA5BP1
miRBase
Accession/Entrez ID		 zikv-mir-5 340591
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - CA5BL//CA5BP//PRO2325

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CA5BP1
chrX:15710021(+) A-I      intronic
chrX:15709639(+) A-I      intronic
chrX:15710596(+) A-I      intronic
chrX:15709487(+) A-I      intronic
chrX:15710623(+) A-I      intronic
chrX:15710472(+) A-I      intronic
chrX:15709501(+) A-I      intronic
chrX:15710518(+) A-I      intronic
chrX:15710490(+) A-I      intronic
chrX:15710453(+) A-I      intronic
chrX:15710413(+) A-I      intronic
chrX:15710147(+) A-I      intronic
chrX:15710076(+) A-I      intronic
chrX:15710418(+) A-I      intronic
chrX:15710612(+) A-I      intronic
chrX:15710556(+) A-I      intronic
chrX:15709634(+) A-I      intronic
chrX:15710473(+) A-I      intronic
chrX:15710177(+) A-I      intronic
chrX:15710561(+) A-I      intronic
chrX:15709603(+) A-I      intronic
chrX:15709491(+) A-I      intronic
chrX:15710122(+) A-I      intronic
chrX:15710201(+) A-I      intronic
chrX:15710512(+) A-I      intronic
chrX:15709515(+) A-I      intronic
chrX:15710652(+) A-I      intronic
chrX:15710522(+) A-I      intronic
chrX:15709447(+) A-I      intronic
chrX:15710045(+) A-I      intronic
chrX:15710591(+) A-I      intronic
chrX:15709463(+) A-I      intronic
chrX:15710650(+) A-I      intronic
chrX:15709629(+) A-I      intronic
chrX:15709593(+) A-I      intronic
chrX:15709471(+) A-I      intronic
chrX:15710175(+) A-I      intronic
chrX:15710576(+) A-I      intronic
chrX:15701816(+) A-I      intronic
chrX:15710226(+) A-I      intronic
chrX:15710502(+) A-I      intronic
chrX:15709442(+) A-I      intronic
chrX:15709441(+) A-I      intronic
chrX:15712214(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CA5BP1
chrX:15710090(+) A-I intron -    22327324
chrX:15710502(+) A-I intron -    22327324
chrX:15719406(+) T-G intron -    21725310
chrX:15709447(+) A-G intron -    22484847
chrX:15709603(+) A-G intron -    22484847
chrX:15709648(+) A-G intron -    22484847
chrX:15710473(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CA5BP1
chrX:15693061-15693062(+) m6A exon       -
chrX:15693109-15693110(+) m6A exon//intron       -
chrX:15694421-15694422(+) m6A exon//intron       24284625
chrX:15694436-15694437(+) m6A exon//intron       24284625
chrX:15709272-15709273(+) m6A exon//intron       24284625
chrX:15715450-15715451(+) m6A exon//intron       24981863//22608085
chrX:15715463-15715464(+) m6A exon//intron       24981863//22608085
chrX:15715544-15715545(+) m6A exon//intron       24284625//24209618//24981863//22608085
chrX:15715620-15715621(+) m6A exon//intron       24284625//24209618//24981863//22608085
chrX:15715651-15715652(+) m6A exon//intron       24284625//24209618//24981863//22608085
chrX:15715793-15715794(+) m6A exon//intron       24284625//24209618//24981863//22575960//22608085
chrX:15720913-15720914(+) m6A exon       24284625//24209618//25456834//24981863//22575960//22608085
chrX:15721031-15721032(+) m6A exon       24284625//24209618//25456834//24981863//22575960//22608085
chrX:15721106-15721107(+) m6A exon       24284625//24209618//25456834//24981863//22575960//22608085
chrX:15721276-15721277(+) m6A exon       24284625//25456834//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CA5BP1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: CA5BP1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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