Detail Information

Basic Information:


  VIRBase ID:  

VHID00050145

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 CHAC2
miRBase
Accession/Entrez ID		 zikv-mir-5 494143
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - GCG1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CHAC2
chr2:54000910(+) A-I      intronic
chr2:54000707(+) A-I      intronic
chr2:54000733(+) A-I      intronic
chr2:54001116(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CHAC2
chr2:53995078-53995079(+) m6A CDS       24209618//24981863
chr2:53995135-53995136(+) m6A CDS       24209618
chr2:54001324-54001325(+) m1A CDS       26863196
chr2:54001371-54001372(+) m6A CDS       24284625//24209618//22608085
chr2:54001412-54001413(+) m6A CDS       24284625//24209618//24981863//22608085
chr2:54001440-54001441(+) m6A CDS       24284625//24209618//24981863//22608085
chr2:54001483-54001484(+) m6A CDS       24284625//24209618//24981863//22608085
chr2:54001493-54001494(+) m6A CDS       24284625//24209618//24981863//22608085
chr2:54001547-54001548(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr2:54001567-54001568(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr2:54001640-54001641(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr2:54001645-54001646(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr2:54001763-54001764(+) m6A 3'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CHAC2
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: CHAC2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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