Detail Information

Basic Information:


  VIRBase ID:  

VHID00050099

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 NOMO3
miRBase
Accession/Entrez ID		 zikv-mir-5 408050
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - Nomo

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NOMO3
chr16:16361366(+) A-I      intronic
chr16:16331590(+) A-I      intronic
chr16:16361396(+) A-I      intronic
chr16:16350156(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NOMO3
chr16:16388045-16388046(+) Y 3'UTR//CDS//exon       25219674
chr16:16388122-16388123(+) m6A 3'UTR//CDS//exon       24981863
chr16:16388134-16388135(+) m6A 3'UTR//CDS//exon       24981863
chr16:16388141-16388142(+) m6A 3'UTR//CDS//exon       24981863
chr16:16388167-16388168(+) m6A 3'UTR//exon//intron       24981863
chr16:16388188-16388189(+) m6A 3'UTR//exon//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NOMO3
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|HeLa-S3 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: NOMO3

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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