Detail Information

Basic Information:


  VIRBase ID:  

VHID00049826

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 PRSS53
miRBase
Accession/Entrez ID		 zikv-mir-5 339105
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - POL3S//UNQ308

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PRSS53
chr16:31098483(-) A-I      ncRNA
chr16:31098929(-) A-I      Syn:Gln->Gln
chr16:31100940(-) A-I      ncRNA
chr16:31100939(-) A-I      ncRNA
chr16:31100927(-) A-I      ncRNA
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PRSS53
chr16:31098531(-) A-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PRSS53
chr16:31094918-31094919(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828
chr16:31094934-31094935(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828
chr16:31094975-31094976(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//22575960//22608085
chr16:31095086-31095087(-) m6A 3'UTR//exon       25456834//24981863//27371828//22575960
chr16:31095103-31095104(-) m6A 3'UTR//exon       25456834//24981863//27371828//22575960
chr16:31095158-31095159(-) m6A exon//intron       25456834//24981863//27371828
chr16:31095179-31095180(-) m6A exon//intron       25456834//27371828
chr16:31095219-31095220(-) m6A exon//intron       27371828
chr16:31095320-31095321(-) m6A exon//intron       27371828
chr16:31095395-31095396(-) m6A exon//intron       24284625//24981863//27371828
chr16:31095411-31095412(-) m6A exon//intron       24284625//24981863//27371828
chr16:31095482-31095483(-) m6A CDS//exon       24284625//25456834//24981863//27371828
chr16:31095507-31095508(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536
chr16:31095525-31095526(-) m6A CDS//exon       25456834//27371828//27773536
chr16:31095738-31095739(-) m6A exon//intron       24284625//27773535
chr16:31095767-31095768(-) m6A exon//intron       24284625//27773535
chr16:31095785-31095786(-) m6A exon//intron       24284625//27773535
chr16:31095807-31095808(-) m6A exon//intron       24284625//27773535
chr16:31096302-31096303(-) m6A CDS//exon       24284625
chr16:31096307-31096308(-) m6A CDS//exon       24284625
chr16:31096498-31096499(-) m6A CDS//exon       27773536
chr16:31097574-31097575(-) m6A exon//intron       27371828
chr16:31097586-31097587(-) m6A exon//intron       27371828
chr16:31097595-31097596(-) m6A exon//intron       27371828
chr16:31099012-31099013(-) m6A CDS//exon       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PRSS53
Chromatin K562 cells     -
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: PRSS53

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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