Detail Information

Basic Information:


  VIRBase ID:  

VHID00049663

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 ASPM
miRBase
Accession/Entrez ID		 zikv-mir-5 259266
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - ASP//Calmbp1//MCPH5

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ASPM
chr1:197067859(-) A-I      intronic
chr1:197107709(-) A-I      intronic
chr1:197067849(-) A-I      intronic
chr1:197067183(-) A-I      intronic
chr1:197067244(-) A-I      intronic
chr1:197067850(-) A-I      intronic
chr1:197067182(-) A-I      intronic
chr1:197056302(-) A-I      intronic
chr1:197104889(-) A-I      intronic
chr1:197067790(-) A-I      intronic
chr1:197067811(-) A-I      intronic
chr1:197067851(-) A-I      intronic
chr1:197067844(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ASPM
chr1:197067851(-) A-I intron -    22327324
chr1:197067790(-) A-G intron -    22484847
chr1:197067811(-) A-G intron -    22484847
chr1:197067844(-) A-G intron -    22484847
chr1:197067849(-) A-G intron -    22484847
chr1:197067850(-) A-G intron -    22484847
chr1:197067851(-) A-G intron -    22484847
chr1:197067183(-) A-G intron -    22484847
chr1:197067244(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ASPM
chr1:197053328-197053329(-) m6A 3'UTR       27773535
chr1:197053334-197053335(-) m6A 3'UTR       27773535
chr1:197053443-197053444(-) m6A 3'UTR       27773535
chr1:197069671-197069672(-) m6A CDS//intron       24981863//22608085
chr1:197069680-197069681(-) m6A CDS//intron       24981863//22608085
chr1:197069749-197069750(-) m6A CDS//intron       24981863//22575960//22608085
chr1:197069757-197069758(-) m6A CDS//intron       24981863//22575960//22608085
chr1:197069877-197069878(-) m6A CDS//intron       27371828//22575960//22608085
chr1:197069884-197069885(-) m6A CDS//intron       27371828//22575960//22608085
chr1:197070036-197070037(-) m6A CDS//intron       27773535//22608085
chr1:197070115-197070116(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197070150-197070151(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197070179-197070180(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr1:197070192-197070193(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr1:197070243-197070244(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr1:197070252-197070253(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr1:197070400-197070401(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197070511-197070512(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr1:197070522-197070523(-) Cm CDS//intron       -
chr1:197070523-197070524(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr1:197070533-197070534(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr1:197070539-197070540(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr1:197070564-197070565(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr1:197070577-197070578(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr1:197070601-197070602(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:197070721-197070722(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:197070739-197070740(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:197070793-197070794(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197070834-197070835(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197070868-197070869(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:197070876-197070877(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:197070894-197070895(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:197070970-197070971(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071036-197071037(-) m6A CDS//intron       27773535//22608085
chr1:197071174-197071175(-) m6A CDS//intron       24284625//24981863//22575960//22608085
chr1:197071182-197071183(-) m6A CDS//intron       24284625//24981863//22575960//22608085
chr1:197071225-197071226(-) m6A CDS//intron       24284625//24981863//22575960//22608085
chr1:197071231-197071232(-) m6A CDS//intron       24284625//24981863//22575960//22608085
chr1:197071255-197071256(-) m6A CDS//intron       24284625//24981863//22575960//22608085
chr1:197071306-197071307(-) m6A CDS//intron       24284625//24981863//22575960//22608085
chr1:197071518-197071519(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071557-197071558(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071609-197071610(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071666-197071667(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071691-197071692(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071728-197071729(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071761-197071762(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071768-197071769(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071784-197071785(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071809-197071810(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197071827-197071828(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197072047-197072048(-) m6A CDS//intron       27773535
chr1:197072094-197072095(-) m6A CDS//intron       27773535//22608085
chr1:197072129-197072130(-) m6A CDS//intron       27773535//22608085
chr1:197072205-197072206(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197072322-197072323(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197072344-197072345(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197072485-197072486(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22575960//22608085
chr1:197072496-197072497(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22575960//22608085
chr1:197072542-197072543(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22575960//22608085
chr1:197072577-197072578(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22575960//22608085
chr1:197072616-197072617(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:197072635-197072636(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:197072689-197072690(-) m6A CDS//intron       27773535//22575960//22608085
chr1:197072703-197072704(-) Cm CDS//intron       -
chr1:197072704-197072705(-) m6A CDS//intron       22575960//22608085
chr1:197072760-197072761(-) m6A CDS//intron       24981863//22575960//22608085
chr1:197072775-197072776(-) m6A CDS//intron       24981863//22575960//22608085
chr1:197072793-197072794(-) m6A CDS//intron       24981863//22608085
chr1:197072914-197072915(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197072990-197072991(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22608085
chr1:197073178-197073179(-) m6A CDS//intron       24284625//27773535//22608085
chr1:197073292-197073293(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197073304-197073305(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197073486-197073487(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:197073540-197073541(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:197073595-197073596(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:197073627-197073628(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197073638-197073639(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197073656-197073657(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197073661-197073662(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197073706-197073707(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197073730-197073731(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr1:197074000-197074001(-) m6A CDS//intron       24981863//27773535
chr1:197074147-197074148(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197104298-197104299(-) m6A CDS//intron       27773535
chr1:197104335-197104336(-) m6A CDS//intron       27773535
chr1:197104361-197104362(-) m6A CDS//intron       27773535
chr1:197107986-197107987(-) m6A intron       27773535//27371828//22608085
chr1:197108050-197108051(-) m6A intron       27773535//27371828//22608085
chr1:197108101-197108102(-) m6A intron       27773535//27371828//22608085
chr1:197108143-197108144(-) m6A intron       27773535//27371828//22608085
chr1:197108186-197108187(-) m6A intron       27773535//27371828//22608085
chr1:197108221-197108222(-) m6A intron       27371828//22608085
chr1:197108899-197108900(-) m6A CDS//intron       27773535
chr1:197108909-197108910(-) m6A CDS//intron       27773535
chr1:197108951-197108952(-) m6A CDS//intron       27773535
chr1:197108956-197108957(-) m6A CDS//intron       27773535
chr1:197108968-197108969(-) m6A CDS//intron       24981863//27773535
chr1:197108983-197108984(-) m6A CDS//intron       24981863//27773535
chr1:197111463-197111464(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197111477-197111478(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197111532-197111533(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197111550-197111551(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197111605-197111606(-) m6A CDS//intron       24981863//27773535//22608085
chr1:197111800-197111801(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197111839-197111840(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197111853-197111854(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197111858-197111859(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197111926-197111927(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197111983-197111984(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:197112022-197112023(-) m6A CDS//intron       24284625//27773535//22608085
chr1:197112153-197112154(-) m6A CDS//intron       27773535
chr1:197112250-197112251(-) m6A CDS//intron       27773535
chr1:197112496-197112497(-) m6A CDS//intron       27773535
chr1:197112546-197112547(-) m6A CDS//intron       27773535
chr1:197112610-197112611(-) m6A CDS//intron       27773535
chr1:197112755-197112756(-) m6A CDS//intron       24981863//27773535
chr1:197112791-197112792(-) m6A CDS//intron       24981863//27773535
chr1:197112849-197112850(-) m6A CDS       24981863//27773535
chr1:197113134-197113135(-) m6A CDS       24981863
chr1:197113196-197113197(-) m6A CDS       -
chr1:197115310-197115311(-) m6A CDS       -
chr1:197115364-197115365(-) m6A CDS       27773536
chr1:197115559-197115560(-) m6A CDS       27773536//22575960
chr1:197115800-197115801(-) m6A 5'UTR       24284625//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ASPM
Centrosome Cells (HeLa-Kyoto|HeLa)     33649340
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: ASPM

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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