Detail Information

Basic Information:


  VIRBase ID:  

VHID00048942

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 ARL14EP
miRBase
Accession/Entrez ID		 zikv-mir-5 120534
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - ARF7EP//C11orf46//dJ299F11.1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ARL14EP
chr11:30349872(+) A-I      intronic
chr11:30349889(+) A-I      intronic
chr11:30349833(+) A-I      intronic
chr11:30349443(+) A-I      intronic
chr11:30349863(+) A-I      intronic
chr11:30349894(+) A-I      intronic
chr11:30349294(+) A-I      intronic
chr11:30349885(+) A-I      intronic
chr11:30349870(+) A-I      intronic
chr11:30349923(+) A-I      intronic
chr11:30349810(+) A-I      intronic
chr11:30349899(+) A-I      intronic
chr11:30349792(+) A-I      intronic
chr11:30349766(+) A-I      intronic
chr11:30349251(+) A-I      intronic
chr11:30349451(+) A-I      intronic
chr11:30348781(+) A-I      intronic
chr11:30349345(+) A-I      intronic
chr11:30349250(+) A-I      intronic
chr11:30349339(+) A-I      intronic
chr11:30350071(+) A-I      intronic
chr11:30349942(+) A-I      intronic
chr11:30349796(+) A-I      intronic
chr11:30349464(+) A-I      intronic
chr11:30349954(+) A-I      intronic
chr11:30349791(+) A-I      intronic
chr11:30349444(+) A-I      intronic
chr11:30351075(+) A-I      intronic
chr11:30349927(+) A-I      intronic
chr11:30349753(+) A-I      intronic
chr11:30349228(+) A-I      intronic
chr11:30349835(+) A-I      intronic
chr11:30349472(+) A-I      intronic
chr11:30349710(+) A-I      intronic
chr11:30349860(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ARL14EP
chr11:30344665-30344666(+) m6A 5'UTR       24209618//24981863//22608085
chr11:30344704-30344705(+) m6A 5'UTR//exon       24209618//24981863//22608085
chr11:30352453-30352454(+) m6A 5'UTR//exon       24284625//24209618//24981863//22608085
chr11:30352461-30352462(+) m6A 5'UTR//exon       24284625//24209618//24981863//22608085
chr11:30352552-30352553(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr11:30352582-30352583(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr11:30352630-30352631(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr11:30352652-30352653(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr11:30352815-30352816(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr11:30352892-30352893(+) m6A CDS//exon       24284625//24981863//22608085
chr11:30352908-30352909(+) m6A CDS//exon       24284625//22608085
chr11:30353255-30353256(+) m6A exon//intron       22608085
chr11:30353310-30353311(+) m6A exon//intron       24284625//22608085
chr11:30353336-30353337(+) m6A exon//intron       24284625//22608085
chr11:30354418-30354419(+) m6A CDS//exon       24981863//22608085
chr11:30354466-30354467(+) m6A CDS//exon       24981863//22608085
chr11:30354484-30354485(+) m6A CDS//exon       24284625//24981863//22608085
chr11:30354536-30354537(+) m6A CDS       24284625//24981863//22608085
chr11:30358178-30358179(+) m6A CDS       24284625//24981863//22608085
chr11:30358202-30358203(+) m6A CDS       24284625//24981863//22608085
chr11:30358329-30358330(+) m6A CDS       24981863//22608085
chr11:30358355-30358356(+) m6A 3'UTR       24981863//22608085
chr11:30359029-30359030(+) m6A 3'UTR       24981863
chr11:30359114-30359115(+) m6A 3'UTR       24981863
chr11:30359152-30359153(+) m6A 3'UTR       24981863
chr11:30359192-30359193(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ARL14EP
Chromatin K562 cells     -
Exosome Blood     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: ARL14EP

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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