Detail Information

Basic Information:


  VIRBase ID:  

VHID00048594

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 FAM207A
miRBase
Accession/Entrez ID		 zikv-mir-5 85395
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - C21orf70//PRED56

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FAM207A
chr21:46375492(+) A-I      intronic
chr21:46375063(+) A-I      intronic
chr21:46375494(+) A-I      intronic
chr21:46375010(+) A-I      intronic
chr21:46375510(+) A-I      intronic
chr21:46375470(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FAM207A
chr21:46363634-46363635(+) m6A CDS       24284625//24209618
chr21:46363644-46363645(+) m6A CDS       24284625//24209618
chr21:46378188-46378189(+) m6A exon//intron       24284625//24209618//24981863
chr21:46380028-46380029(+) m6A CDS//exon       24284625//24209618//24981863
chr21:46386964-46386965(+) m6A CDS//exon       24284625//24209618//24981863
chr21:46387023-46387024(+) m6A CDS//exon       24284625//24209618//24981863
chr21:46389050-46389051(+) m6A CDS//intron       24284625//24209618
chr21:46393168-46393169(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085
chr21:46396607-46396608(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr21:46396750-46396751(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr21:46396789-46396790(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr21:46396858-46396859(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FAM207A
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: FAM207A

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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