Detail Information

Basic Information:


  VIRBase ID:  

VHID00048109

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 KLHL36
miRBase
Accession/Entrez ID		 zikv-mir-5 79786
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - C16orf44

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KLHL36
chr16:84689163(+) A-I      intronic
chr16:84700499(+) A-I      3'UTR
chr16:84700521(+) A-I      3'UTR
chr16:84700514(+) A-I      3'UTR
chr16:84700465(+) A-I      3'UTR
chr16:84700466(+) A-I      3'UTR
chr16:84700491(+) A-I      3'UTR
chr16:84700523(+) A-I      3'UTR
chr16:84700498(+) A-I      3'UTR
chr16:84688058(+) A-I      intronic
chr16:84688477(+) A-I      intronic
chr16:84688155(+) A-I      intronic
chr16:84688072(+) A-I      intronic
chr16:84690159(+) A-I      intronic
chr16:84688478(+) A-I      intronic
chr16:84688111(+) A-I      intronic
chr16:84689625(+) A-I      intronic
chr16:84689049(+) A-I      intronic
chr16:84689199(+) A-I      intronic
chr16:84698640(+) A-I      3'UTR
chr16:84690127(+) A-I      intronic
chr16:84688350(+) A-I      intronic
chr16:84692791(+) A-I      intronic
chr16:84687358(+) A-I      intronic
chr16:84689976(+) A-I      intronic
chr16:84689085(+) A-I      intronic
chr16:84687335(+) A-I      intronic
chr16:84689084(+) A-I      intronic
chr16:84689638(+) A-I      intronic
chr16:84688119(+) A-I      intronic
chr16:84689147(+) A-I      intronic
chr16:84686667(+) A-I      intronic
chr16:84689127(+) A-I      intronic
chr16:84690123(+) A-I      intronic
chr16:84690158(+) A-I      intronic
chr16:84686136(+) A-I      intronic
chr16:84688317(+) A-I      intronic
chr16:84687992(+) A-I      intronic
chr16:84700676(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED KLHL36
chr16:84689049(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KLHL36
chr16:84688716-84688717(+) Am intron       -
chr16:84690717-84690718(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr16:84690810-84690811(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84690849-84690850(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84690930-84690931(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr16:84691113-84691114(+) m6A CDS       24284625//25456834//24981863//22608085
chr16:84691265-84691266(+) m6A CDS       24284625//25456834//24981863//22608085
chr16:84691482-84691483(+) m6A CDS       24284625//25456834//24981863//22608085
chr16:84691537-84691538(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr16:84691587-84691588(+) m6A exon//intron       24284625//24209618
chr16:84693378-84693379(+) m6A CDS//exon//intron       24209618
chr16:84693417-84693418(+) m6A CDS//exon//intron       24284625//24209618//24981863
chr16:84693488-84693489(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr16:84695218-84695219(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84695272-84695273(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr16:84695295-84695296(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr16:84695466-84695467(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84695560-84695561(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84695577-84695578(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84695689-84695690(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr16:84695725-84695726(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84695759-84695760(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84695793-84695794(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84695822-84695823(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:84696124-84696125(+) m6A exon       24284625//24981863//22608085
chr16:84696134-84696135(+) m6A exon       24284625//24981863//22608085
chr16:84696185-84696186(+) m6A exon       24284625//24209618//24981863//22608085
chr16:84696317-84696318(+) m6A exon       24209618//24981863//22608085
chr16:84696369-84696370(+) m6A exon       24981863//22608085
chr16:84696382-84696383(+) m6A exon       24981863//22608085
chr16:84697068-84697069(+) m6A exon       24981863
chr16:84697166-84697167(+) m6A exon       24981863
chr16:84697457-84697458(+) m6A exon       24981863
chr16:84697565-84697566(+) m6A exon       24981863
chr16:84697594-84697595(+) m6A exon       24981863
chr16:84697602-84697603(+) m6A exon       24981863
chr16:84697617-84697618(+) m6A exon       24981863
chr16:84697687-84697688(+) m6A exon       24981863
chr16:84697731-84697732(+) m6A exon       24981863
chr16:84697742-84697743(+) m6A exon       24981863
chr16:84697756-84697757(+) m6A exon       24981863
chr16:84697819-84697820(+) m6A exon       24981863
chr16:84697882-84697883(+) m6A exon       24981863
chr16:84697941-84697942(+) m6A exon       24981863
chr16:84698413-84698414(+) m6A exon       24981863
chr16:84698429-84698430(+) m6A exon       24981863
chr16:84698453-84698454(+) m6A exon       24981863
chr16:84700055-84700056(+) m6A exon       -
chr16:84700588-84700589(+) m6A exon       24981863
chr16:84700657-84700658(+) m6A exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KLHL36
Chromatin K562 cells     -
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: KLHL36

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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