Detail Information

Basic Information:


  VIRBase ID:  

VHID00046567

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-5 TMEM87A
miRBase
Accession/Entrez ID		 zikv-mir-5 25963
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TMEM87A
chr15:42552470(-) A-I      intronic
chr15:42552451(-) A-I      intronic
chr15:42552327(-) A-I      intronic
chr15:42517923(-) A-I      intronic
chr15:42517874(-) A-I      intronic
chr15:42517867(-) A-I      intronic
chr15:42515479(-) A-I      intronic
chr15:42515469(-) A-I      intronic
chr15:42515459(-) A-I      intronic
chr15:42514394(-) A-I      intronic
chr15:42514389(-) A-I      intronic
chr15:42555830(-) A-I      intronic
chr15:42517881(-) A-I      intronic
chr15:42515325(-) A-I      intronic
chr15:42514935(-) A-I      intronic
chr15:42554736(-) A-I      intronic
chr15:42554754(-) A-I      intronic
chr15:42554759(-) A-I      intronic
chr15:42554760(-) A-I      intronic
chr15:42555755(-) A-I      intronic
chr15:42555859(-) A-I      intronic
chr15:42514413(-) A-I      intronic
chr15:42514410(-) A-I      intronic
chr15:42514405(-) A-I      intronic
chr15:42514077(-) A-I      intronic
chr15:42513216(-) A-I      intronic
chr15:42513194(-) A-I      intronic
chr15:42513110(-) A-I      intronic
chr15:42513101(-) A-I      intronic
chr15:42513037(-) A-I      intronic
chr15:42512986(-) A-I      intronic
chr15:42514395(-) A-I      intronic
chr15:42515374(-) A-I      intronic
chr15:42515509(-) A-I      intronic
chr15:42514087(-) A-I      intronic
chr15:42515531(-) A-I      intronic
chr15:42515425(-) A-I      intronic
chr15:42547299(-) A-I      intronic
chr15:42514504(-) A-I      intronic
chr15:42514905(-) A-I      intronic
chr15:42517876(-) A-I      intronic
chr15:42517905(-) A-I      intronic
chr15:42522256(-) A-I      intronic
chr15:42552320(-) A-I      intronic
chr15:42517898(-) A-I      intronic
chr15:42555884(-) A-I      intronic
chr15:42535221(-) A-I      intronic
chr15:42531354(-) A-I      intronic
chr15:42515589(-) A-I      intronic
chr15:42517894(-) A-I      intronic
chr15:42552489(-) A-I      intronic
chr15:42535991(-) A-I      intronic
chr15:42515508(-) A-I      intronic
chr15:42531494(-) A-I      intronic
chr15:42530411(-) A-I      intronic
chr15:42513230(-) A-I      intronic
chr15:42514868(-) A-I      intronic
chr15:42530449(-) A-I      intronic
chr15:42531403(-) A-I      intronic
chr15:42552326(-) A-I      intronic
chr15:42514889(-) A-I      intronic
chr15:42515347(-) A-I      intronic
chr15:42555824(-) A-I      intronic
chr15:42530852(-) A-I      intronic
chr15:42530619(-) A-I      intronic
chr15:42530656(-) A-I      intronic
chr15:42530711(-) A-I      intronic
chr15:42537791(-) A-I      intronic
chr15:42531355(-) A-I      intronic
chr15:42531387(-) A-I      intronic
chr15:42514455(-) A-I      intronic
chr15:42531412(-) A-I      intronic
chr15:42531406(-) A-I      intronic
chr15:42531416(-) A-I      intronic
chr15:42531466(-) A-I      intronic
chr15:42552460(-) A-I      intronic
chr15:42507508(-) A-I      intronic
chr15:42531495(-) A-I      intronic
chr15:42535894(-) A-I      intronic
chr15:42535974(-) A-I      intronic
chr15:42522257(-) A-I      intronic
chr15:42552528(-) A-I      intronic
chr15:42515491(-) A-I      intronic
chr15:42522273(-) A-I      intronic
chr15:42535985(-) A-I      intronic
chr15:42531471(-) A-I      intronic
chr15:42531377(-) A-I      intronic
chr15:42548467(-) A-I      intronic
chr15:42551423(-) A-I      intronic
chr15:42551435(-) A-I      intronic
chr15:42548477(-) A-I      intronic
chr15:42551436(-) A-I      intronic
chr15:42507587(-) A-I      intronic
chr15:42552472(-) A-I      intronic
chr15:42507590(-) A-I      intronic
chr15:42550753(-) A-I      3'UTR
chr15:42550891(-) A-I      3'UTR
chr15:42550763(-) A-I      3'UTR
chr15:42550762(-) A-I      3'UTR
chr15:42514951(-) A-I      intronic
chr15:42552354(-) A-I      intronic
chr15:42530705(-) A-I      intronic
chr15:42513086(-) A-I      intronic
chr15:42551449(-) A-I      intronic
chr15:42530475(-) A-I      intronic
chr15:42517985(-) A-I      intronic
chr15:42514064(-) A-I      intronic
chr15:42530544(-) A-I      intronic
chr15:42552556(-) A-I      intronic
chr15:42518336(-) A-I      intronic
chr15:42515528(-) A-I      intronic
chr15:42515334(-) A-I      intronic
chr15:42530831(-) A-I      intronic
chr15:42531511(-) A-I      intronic
chr15:42513262(-) A-I      intronic
chr15:42515434(-) A-I      intronic
chr15:42517972(-) A-I      intronic
chr15:42530545(-) A-I      intronic
chr15:42530938(-) A-I      intronic
chr15:42530668(-) A-I      intronic
chr15:42515507(-) A-I      intronic
chr15:42515571(-) A-I      intronic
chr15:42529951(-) A-I      intronic
chr15:42515345(-) A-I      intronic
chr15:42531512(-) A-I      intronic
chr15:42514604(-) A-I      intronic
chr15:42551488(-) A-I      intronic
chr15:42555822(-) A-I      intronic
chr15:42554099(-) A-I      intronic
chr15:42552353(-) A-I      intronic
chr15:42515496(-) A-I      intronic
chr15:42514530(-) A-I      intronic
chr15:42515443(-) A-I      intronic
chr15:42531339(-) A-I      intronic
chr15:42515030(-) A-I      intronic
chr15:42531505(-) A-I      intronic
chr15:42530427(-) A-I      intronic
chr15:42515534(-) A-I      intronic
chr15:42514931(-) A-I      intronic
chr15:42513390(-) A-I      intronic
chr15:42530522(-) A-I      intronic
chr15:42513439(-) A-I      intronic
chr15:42514937(-) A-I      intronic
chr15:42518368(-) A-I      intronic
chr15:42535208(-) A-I      intronic
chr15:42530415(-) A-I      intronic
chr15:42513914(-) A-I      intronic
chr15:42522204(-) A-I      intronic
chr15:42551524(-) A-I      intronic
chr15:42514324(-) A-I      intronic
chr15:42551497(-) A-I      intronic
chr15:42535435(-) A-I      intronic
chr15:42514853(-) A-I      intronic
chr15:42535855(-) A-I      intronic
chr15:42529944(-) A-I      intronic
chr15:42514854(-) A-I      intronic
chr15:42530428(-) A-I      intronic
chr15:42513850(-) A-I      intronic
chr15:42530746(-) A-I      intronic
chr15:42514135(-) A-I      intronic
chr15:42531421(-) A-I      intronic
chr15:42531353(-) A-I      intronic
chr15:42552461(-) A-I      intronic
chr15:42530414(-) A-I      intronic
chr15:42513871(-) A-I      intronic
chr15:42518435(-) A-I      intronic
chr15:42530549(-) A-I      intronic
chr15:42552350(-) A-I      intronic
chr15:42530765(-) A-I      intronic
chr15:42552379(-) A-I      intronic
chr15:42551417(-) A-I      intronic
chr15:42513238(-) A-I      intronic
chr15:42529942(-) A-I      intronic
chr15:42535990(-) A-I      intronic
chr15:42552360(-) A-I      intronic
chr15:42509355(-) A-I      intronic
chr15:42552464(-) A-I      intronic
chr15:42531476(-) A-I      intronic
chr15:42514940(-) A-I      intronic
chr15:42515373(-) A-I      intronic
chr15:42514086(-) A-I      intronic
chr15:42530458(-) A-I      intronic
chr15:42530839(-) A-I      intronic
chr15:42515346(-) A-I      intronic
chr15:42535920(-) A-I      intronic
chr15:42514934(-) A-I      intronic
chr15:42535924(-) A-I      intronic
chr15:42529982(-) A-I      intronic
chr15:42551485(-) A-I      intronic
chr15:42551459(-) A-I      intronic
chr15:42515031(-) A-I      intronic
chr15:42514936(-) A-I      intronic
chr15:42552490(-) A-I      intronic
chr15:42535220(-) A-I      intronic
chr15:42514492(-) A-I      intronic
chr15:42509325(-) A-I      intronic
chr15:42530460(-) A-I      intronic
chr15:42530548(-) A-I      intronic
chr15:42550634(-) A-I      3'UTR
chr15:42550721(-) A-I      3'UTR
chr15:42550789(-) A-I      3'UTR
chr15:42550916(-) A-I      3'UTR
chr15:42550876(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TMEM87A
chr15:42514606(-) A-I intron -    21960545
chr15:42530428(-) A-I intron -    21960545
chr15:42530823(-) A-I intron -    21960545
chr15:42530831(-) A-I intron -    21960545
chr15:42530938(-) A-I intron -    21960545
chr15:42552556(-) A-I intron -    21960545
chr15:42514086(-) A-G intron -    22484847
chr15:42515531(-) A-G intron -    22484847
chr15:42515534(-) A-G intron -    22484847
chr15:42530427(-) A-G intron -    22484847
chr15:42550721(-) A-G exon 3'UTR    22484847
chr15:42551485(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TMEM87A
chr15:42502863-42502864(-) m6A 3'UTR       24284625//24981863//22575960//22608085
chr15:42502877-42502878(-) m6A 3'UTR       24284625//24981863//22575960//22608085
chr15:42502907-42502908(-) m6A 3'UTR       24284625//24981863//26404942//22575960//22608085
chr15:42502931-42502932(-) m6A 3'UTR       24284625//24981863//26404942//22575960//22608085
chr15:42502965-42502966(-) m6A 3'UTR       24284625//24981863//26404942//22575960//22608085
chr15:42502989-42502990(-) m6A 3'UTR       24284625//24981863//22575960//22608085
chr15:42503330-42503331(-) m6A 3'UTR       27773535
chr15:42503578-42503579(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr15:42503613-42503614(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr15:42503657-42503658(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22608085
chr15:42503726-42503727(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr15:42503740-42503741(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr15:42503749-42503750(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//22608085
chr15:42510085-42510086(-) m6A exon//intron       27773535
chr15:42511808-42511809(-) m6A CDS       24981863//27773535//22575960
chr15:42511814-42511815(-) m6A CDS       24981863//27773535//22575960
chr15:42512290-42512291(-) m6A CDS       24981863//27773535//22575960
chr15:42565506-42565507(-) m6A 5'UTR//CDS//exon       24981863
chr15:42565643-42565644(-) m6A 5'UTR       24981863
chr15:42565655-42565656(-) m1A 5'UTR       26863196
chr15:42565691-42565692(-) m6A 5'UTR       24981863
chr15:42565714-42565715(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TMEM87A
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-5
Interactor2: TMEM87A

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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