Detail Information

Basic Information:


  VIRBase ID:  

VHID00043035

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 CLUHP3
miRBase
Accession/Entrez ID		 zikv-mir-4 100132341
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - C16orf67//KIAA0664L3//KIAA0664P3//URLC3

RNA Editing:


Resource Symbol Editing Position
Lncediting CLUHP3
    chr16: 31718460
    chr16: 31718758
Resource Symbol Editing Position Change Genetic Region
RADAR CLUHP3
chr16:31718460(+) A-I      ncRNA
chr16:31718758(+) A-I      ncRNA

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CLUHP3
chr16:31713972-31713973(+) m6A exon//intron       -
chr16:31714506-31714507(+) m6A exon       24981863
chr16:31714517-31714518(+) m6A exon       24981863
chr16:31714572-31714573(+) m6A exon       -
chr16:31714639-31714640(+) m6A exon       -
chr16:31718488-31718489(+) m6A exon//intron       24284625//25456834
chr16:31718518-31718519(+) m6A exon//intron       24284625//25456834
chr16:31719313-31719314(+) m6A exon       24284625//24981863//22608085
chr16:31719386-31719387(+) m6A exon       24284625//24209618//25456834//24981863//22575960//22608085
chr16:31719461-31719462(+) m6A exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr16:31719485-31719486(+) m6A exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr16:31719556-31719557(+) m6A exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr16:31719660-31719661(+) m6A exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr16:31720011-31720012(+) m6A exon       24284625//25456834//24981863
chr16:31720139-31720140(+) m6A exon       24284625//22608085
chr16:31720347-31720348(+) m6A exon       24284625//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CLUHP3
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: CLUHP3

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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