Detail Information

Basic Information:


  VIRBase ID:  

VHID00043024

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 FAHD2CP
miRBase
Accession/Entrez ID		 zikv-mir-4 729234
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FAHD2CP
chr2:96677482(+) A-I      intronic
chr2:96683934(+) A-I      intronic
chr2:96683926(+) A-I      intronic
chr2:96683884(+) A-I      intronic
chr2:96677505(+) A-I      intronic
chr2:96683565(+) A-I      intronic
chr2:96681709(+) A-I      intronic
chr2:96683539(+) A-I      intronic
chr2:96681708(+) A-I      intronic
chr2:96677445(+) A-I      intronic
chr2:96677462(+) A-I      intronic
chr2:96683702(+) A-I      intronic
chr2:96678294(+) A-I      intronic
chr2:96683490(+) A-I      intronic
chr2:96677659(+) A-I      intronic
chr2:96677536(+) A-I      intronic
chr2:96677595(+) A-I      intronic
chr2:96677649(+) A-I      intronic
chr2:96683837(+) A-I      intronic
chr2:96683971(+) A-I      intronic
chr2:96683998(+) A-I      intronic
chr2:96677473(+) A-I      intronic
chr2:96677471(+) A-I      intronic
chr2:96683623(+) A-I      intronic
chr2:96683543(+) A-I      intronic
chr2:96677542(+) A-I      intronic
chr2:96681895(+) A-I      intronic
chr2:96683500(+) A-I      intronic
chr2:96678358(+) A-I      intronic
chr2:96677621(+) A-I      intronic
chr2:96683923(+) A-I      intronic
chr2:96686306(+) A-I      intronic
chr2:96677435(+) A-I      intronic
chr2:96678334(+) A-I      intronic
chr2:96678384(+) A-I      intronic
chr2:96677533(+) A-I      intronic
chr2:96677696(+) A-I      intronic
chr2:96683809(+) A-I      intronic
chr2:96683556(+) A-I      intronic
chr2:96677479(+) A-I      intronic
chr2:96678452(+) A-I      intronic
chr2:96677618(+) A-I      intronic
chr2:96677698(+) A-I      intronic
chr2:96677474(+) A-I      intronic
chr2:96683614(+) A-I      intronic
chr2:96678281(+) A-I      intronic
chr2:96677442(+) A-I      intronic
chr2:96683924(+) A-I      intronic
chr2:96677438(+) A-I      intronic
chr2:96683943(+) A-I      intronic
chr2:96677610(+) A-I      intronic
chr2:96677562(+) A-I      intronic
chr2:96678259(+) A-I      intronic
chr2:96678456(+) A-I      intronic
chr2:96683508(+) A-I      intronic
chr2:96683714(+) A-I      intronic
chr2:96677507(+) A-I      intronic
chr2:96678373(+) A-I      intronic
chr2:96678311(+) A-I      intronic
chr2:96678299(+) A-I      intronic
chr2:96683578(+) A-I      intronic
chr2:96678364(+) A-I      intronic
chr2:96683995(+) A-I      intronic
chr2:96677695(+) A-I      intronic
chr2:96683722(+) A-I      intronic
chr2:96683596(+) A-I      intronic
chr2:96678427(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FAHD2CP
chr2:96688437-96688438(+) m6A exon       25456834//22608085
chr2:96688510-96688511(+) m6A exon//intron       24284625//25456834//24981863//22608085
chr2:96688583-96688584(+) m6A exon//intron       24284625//24209618//25456834//24981863//22608085
chr2:96688590-96688591(+) m6A exon//intron       24284625//24209618//25456834//24981863//22608085
chr2:96688661-96688662(+) m6A exon       24284625//24209618//25456834//24981863//22608085
chr2:96688699-96688700(+) m6A exon       24284625//24209618//25456834//24981863//22608085
chr2:96688741-96688742(+) m6A exon       24284625//24209618//25456834//24981863//22608085
chr2:96688747-96688748(+) m6A exon       24284625//24209618//25456834//24981863//22608085
chr2:96688787-96688788(+) m6A exon       24284625//25456834//24981863//22608085
chr2:96688793-96688794(+) m6A exon       24284625//25456834//24981863//22608085
chr2:96688811-96688812(+) m6A exon       24284625//25456834//24981863//22608085
chr2:96688829-96688830(+) m6A exon       24284625//25456834//24981863//22608085
chr2:96688840-96688841(+) m6A exon       24284625//25456834//24981863//22608085
chr2:96688983-96688984(+) m6A exon       24284625//25456834//22608085
chr2:96689050-96689051(+) m6A exon       24284625//25456834//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FAHD2CP
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: FAHD2CP

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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