Detail Information

Basic Information:


  VIRBase ID:  

VHID00043020

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 NCF1C
miRBase
Accession/Entrez ID		 zikv-mir-4 654817
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - SH3PXD1C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NCF1C
chr7:74580123(-) A-I      intronic
chr7:74580109(-) A-I      intronic
chr7:74580094(-) A-I      intronic
chr7:74576127(-) A-I      intronic
chr7:74576001(-) A-I      intronic
chr7:74580106(-) A-I      intronic
chr7:74581568(-) A-I      intronic
chr7:74581578(-) A-I      intronic
chr7:74575991(-) A-I      intronic
chr7:74575732(-) A-I      intronic
chr7:74575725(-) A-I      intronic
chr7:74575244(-) A-I      intronic
chr7:74575234(-) A-I      intronic
chr7:74580746(-) A-I      intronic
chr7:74580727(-) A-I      intronic
chr7:74575150(-) A-I      intronic
chr7:74575136(-) A-I      intronic
chr7:74574441(-) A-I      intronic
chr7:74574440(-) A-I      intronic
chr7:74576000(-) A-I      intronic
chr7:74575639(-) A-I      intronic
chr7:74575731(-) A-I      intronic
chr7:74575662(-) A-I      intronic
chr7:74575161(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NCF1C
chr7:74578767-74578768(-) m6A exon       28052920//27371828
chr7:74580967-74580968(-) m6A exon       28052920//27371828
chr7:74582347-74582348(-) m6A exon       27371828
chr7:74582470-74582471(-) m6A exon       -
chr7:74582629-74582630(-) m6A exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NCF1C
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: NCF1C

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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