Detail Information

Basic Information:


  VIRBase ID:  

VHID00043014

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 TSSC2
miRBase
Accession/Entrez ID		 zikv-mir-4 650368
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TSSC2
chr11:3413844(+) A-I      intronic
chr11:3414630(+) A-I      intronic
chr11:3418036(+) A-I      intronic
chr11:3414586(+) A-I      intronic
chr11:3413752(+) A-I      intronic
chr11:3413840(+) A-I      intronic
chr11:3413753(+) A-I      intronic
chr11:3413744(+) A-I      intronic
chr11:3414624(+) A-I      intronic
chr11:3414614(+) A-I      intronic
chr11:3416479(+) A-I      intronic
chr11:3421692(+) A-I      intronic
chr11:3421638(+) A-I      intronic
chr11:3418170(+) A-I      intronic
chr11:3418101(+) A-I      intronic
chr11:3414650(+) A-I      intronic
chr11:3413768(+) A-I      intronic
chr11:3414610(+) A-I      intronic
chr11:3414629(+) A-I      intronic
chr11:3418106(+) A-I      intronic
chr11:3418244(+) A-I      intronic
chr11:3418238(+) A-I      intronic
chr11:3418111(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TSSC2
chr11:3416965-3416966(+) m6A exon//intron       25456834//24981863
chr11:3416971-3416972(+) m6A exon//intron       25456834//24981863
chr11:3418926-3418927(+) m6A exon//intron       24981863
chr11:3418935-3418936(+) m6A exon//intron       24981863
chr11:3419025-3419026(+) m6A exon//intron       24981863
chr11:3419087-3419088(+) m6A exon//intron       24981863
chr11:3428869-3428870(+) m6A exon       25456834
chr11:3428898-3428899(+) m6A exon       25456834
chr11:3428908-3428909(+) m6A exon       25456834
chr11:3429928-3429929(+) m6A exon       25456834//24981863
chr11:3429955-3429956(+) m6A exon       25456834//24981863
chr11:3429970-3429971(+) m6A exon       25456834//24981863
chr11:3430017-3430018(+) m6A exon       25456834//24981863
chr11:3430039-3430040(+) m6A exon       25456834//24981863
chr11:3430067-3430068(+) m6A exon       25456834//24981863
chr11:3430075-3430076(+) m6A exon       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TSSC2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: TSSC2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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