Detail Information

Basic Information:


  VIRBase ID:  

VHID00043001

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 SMG1P1
miRBase
Accession/Entrez ID		 zikv-mir-4 641298
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SMG1P1
chr16:22487893(+) A-I      intronic
chr16:22487919(+) A-I      intronic
chr16:22487906(+) A-I      intronic
chr16:22487887(+) A-I      intronic
chr16:22487871(+) A-I      intronic
chr16:22468013(+) A-I      intronic
chr16:22467985(+) A-I      intronic
chr16:22489704(+) A-I      intronic
chr16:22489699(+) A-I      intronic
chr16:22488496(+) A-I      intronic
chr16:22488460(+) A-I      intronic
chr16:22488435(+) A-I      intronic
chr16:22488433(+) A-I      intronic
chr16:22488430(+) A-I      intronic
chr16:22489652(+) A-I      intronic
chr16:22488423(+) A-I      intronic
chr16:22488407(+) A-I      intronic
chr16:22488403(+) A-I      intronic
chr16:22489564(+) A-I      intronic
chr16:22488390(+) A-I      intronic
chr16:22488363(+) A-I      intronic
chr16:22489700(+) A-I      intronic
chr16:22488316(+) A-I      intronic
chr16:22488302(+) A-I      intronic
chr16:22488282(+) A-I      intronic
chr16:22488258(+) A-I      intronic
chr16:22488245(+) A-I      intronic
chr16:22488028(+) A-I      intronic
chr16:22488006(+) A-I      intronic
chr16:22484462(+) A-I      intronic
chr16:22484108(+) A-I      intronic
chr16:22488318(+) A-I      intronic
chr16:22488500(+) A-I      intronic
chr16:22489648(+) A-I      intronic
chr16:22489607(+) A-I      intronic
chr16:22489606(+) A-I      intronic
chr16:22489604(+) A-I      intronic
chr16:22489601(+) A-I      intronic
chr16:22489594(+) A-I      intronic
chr16:22489565(+) A-I      intronic
chr16:22489687(+) A-I      intronic
chr16:22489685(+) A-I      intronic
chr16:22489558(+) A-I      intronic
chr16:22489332(+) A-I      intronic
chr16:22489331(+) A-I      intronic
chr16:22489246(+) A-I      intronic
chr16:22489207(+) A-I      intronic
chr16:22489222(+) A-I      intronic
chr16:22488485(+) A-I      intronic
chr16:22489258(+) A-I      intronic
chr16:22474075(+) A-I      intronic
chr16:22488488(+) A-I      intronic
chr16:22451169(+) A-I      intronic
chr16:22475121(+) A-I      intronic
chr16:22487817(+) A-I      intronic
chr16:22461184(+) A-I      intronic
chr16:22474079(+) A-I      intronic
chr16:22487809(+) A-I      intronic
chr16:22489259(+) A-I      intronic
chr16:22489243(+) A-I      intronic
chr16:22474506(+) A-I      intronic
chr16:22489290(+) A-I      intronic
chr16:22489289(+) A-I      intronic
chr16:22474107(+) A-I      intronic
chr16:22451170(+) A-I      intronic
chr16:22489299(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SMG1P1
chr16:22448551-22448552(+) m6A exon       25456834//24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SMG1P1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: SMG1P1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...