Detail Information

Basic Information:


  VIRBase ID:  

VHID00042846

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 FAM47E-STBD1
miRBase
Accession/Entrez ID		 zikv-mir-4 100631383
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - FAM47E

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FAM47E-STBD1
chr4:77211124-77211125(+) m6A CDS//intron       -
chr4:77227547-77227548(+) m1A intron       26863196
chr4:77227615-77227616(+) m6A intron       24981863
chr4:77227673-77227674(+) m6A intron       24981863
chr4:77227688-77227689(+) m6A intron       24981863
chr4:77227820-77227821(+) m6A intron       24981863
chr4:77228098-77228099(+) m6A intron       24284625//24209618//25456834//24981863//22608085
chr4:77228110-77228111(+) m6A intron       24284625//24209618//25456834//24981863//22608085
chr4:77228137-77228138(+) m6A intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr4:77230318-77230319(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr4:77230334-77230335(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr4:77230341-77230342(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr4:77230351-77230352(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr4:77230414-77230415(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr4:77230429-77230430(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr4:77230440-77230441(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr4:77230466-77230467(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:77230549-77230550(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:77230617-77230618(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:77230653-77230654(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:77230662-77230663(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:77230755-77230756(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:77230761-77230762(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:77230773-77230774(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:77230783-77230784(+) m1A 3'UTR       26863196
chr4:77230932-77230933(+) m6A 3'UTR       24209618//27773535//22608085
chr4:77230956-77230957(+) m6A 3'UTR       24209618//27773535//22608085
chr4:77231105-77231106(+) m6A 3'UTR       24981863//27773535
chr4:77231185-77231186(+) m6A 3'UTR       24981863
chr4:77231213-77231214(+) m6A 3'UTR       24981863
chr4:77231970-77231971(+) m6A 3'UTR       24981863
chr4:77232043-77232044(+) m6A 3'UTR       24981863
chr4:77232095-77232096(+) m6A 3'UTR       24284625//24981863
chr4:77232182-77232183(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FAM47E-STBD1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: FAM47E-STBD1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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