Detail Information

Basic Information:


  VIRBase ID:  

VHID00042515

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 PCNX3
miRBase
Accession/Entrez ID		 zikv-mir-4 399909
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - PCNXL3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PCNX3
chr11:65388971(+) A-I      intronic
chr11:65399051(+) A-I      intronic
chr11:65399034(+) A-I      intronic
chr11:65398963(+) A-I      intronic
chr11:65398899(+) A-I      intronic
chr11:65398894(+) A-I      intronic
chr11:65398952(+) A-I      intronic
chr11:65398983(+) A-I      intronic
chr11:65400390(+) A-I      intronic
chr11:65400240(+) A-I      intronic
chr11:65400295(+) A-I      intronic
chr11:65400319(+) A-I      intronic
chr11:65398919(+) A-I      intronic
chr11:65400381(+) A-I      intronic
chr11:65400355(+) A-I      intronic
chr11:65400333(+) A-I      intronic
chr11:65400309(+) A-I      intronic
chr11:65400255(+) A-I      intronic
chr11:65399062(+) A-I      intronic
chr11:65400236(+) A-I      intronic
chr11:65400490(+) A-I      intronic
chr11:65388753(+) A-I      intronic
chr11:65399036(+) A-I      intronic
chr11:65400399(+) A-I      intronic
chr11:65400463(+) A-I      intronic
chr11:65399300(+) A-I      intronic
chr11:65398972(+) A-I      intronic
chr11:65400302(+) A-I      intronic
chr11:65399032(+) A-I      intronic
chr11:65398851(+) A-I      intronic
chr11:65398966(+) A-I      intronic
chr11:65400328(+) A-I      intronic
chr11:65399045(+) A-I      intronic
chr11:65399009(+) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PCNX3
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: PCNX3

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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