Detail Information

Basic Information:


  VIRBase ID:  

VHID00042437

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 MFSD2B
miRBase
Accession/Entrez ID		 zikv-mir-4 388931
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - SLC59A2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MFSD2B
chr2:24243900(+) A-I      intronic
chr2:24243951(+) A-I      intronic
chr2:24237728(+) A-I      intronic
chr2:24235172(+) A-I      intronic
chr2:24237757(+) A-I      intronic
chr2:24243542(+) A-I      intronic
chr2:24243699(+) A-I      intronic
chr2:24235352(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MFSD2B
chr2:24256099-24256100(+) m6A 3'UTR       -
chr2:24256114-24256115(+) m6A 3'UTR       -
chr2:24272688-24272689(+) m6A intron       25456834
chr2:24272713-24272714(+) m6A intron       25456834
chr2:24272737-24272738(+) m6A intron       25456834
chr2:24276776-24276777(+) m6A 3'UTR       25456834
chr2:24283722-24283723(+) m6A 3'UTR       -
chr2:24283728-24283729(+) m6A 3'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MFSD2B
Chromatin K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: MFSD2B

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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