Detail Information

Basic Information:


  VIRBase ID:  

VHID00041749

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 PRIMPOL
miRBase
Accession/Entrez ID		 zikv-mir-4 201973
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CCDC111//MYP22//Primpol1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PRIMPOL
chr4:185604470(+) A-I      intronic
chr4:185604466(+) A-I      intronic
chr4:185604462(+) A-I      intronic
chr4:185604426(+) A-I      intronic
chr4:185604425(+) A-I      intronic
chr4:185604424(+) A-I      intronic
chr4:185586732(+) A-I      intronic
chr4:185581222(+) A-I      intronic
chr4:185604521(+) A-I      intronic
chr4:185581213(+) A-I      intronic
chr4:185581147(+) A-I      intronic
chr4:185603984(+) A-I      intronic
chr4:185581116(+) A-I      intronic
chr4:185604075(+) A-I      intronic
chr4:185579981(+) A-I      intronic
chr4:185579885(+) A-I      intronic
chr4:185579884(+) A-I      intronic
chr4:185579883(+) A-I      intronic
chr4:185579874(+) A-I      intronic
chr4:185576204(+) A-I      intronic
chr4:185573076(+) A-I      intronic
chr4:185572188(+) A-I      intronic
chr4:185593026(+) A-I      intronic
chr4:185587526(+) A-I      intronic
chr4:185599887(+) A-I      intronic
chr4:185604097(+) A-I      intronic
chr4:185604360(+) A-I      intronic
chr4:185599891(+) A-I      intronic
chr4:185599916(+) A-I      intronic
chr4:185600471(+) A-I      intronic
chr4:185604370(+) A-I      intronic
chr4:185604375(+) A-I      intronic
chr4:185600489(+) A-I      intronic
chr4:185600525(+) A-I      intronic
chr4:185604438(+) A-I      intronic
chr4:185604497(+) A-I      intronic
chr4:185605409(+) A-I      intronic
chr4:185605499(+) A-I      intronic
chr4:185600545(+) A-I      intronic
chr4:185601411(+) A-I      intronic
chr4:185601522(+) A-I      intronic
chr4:185601542(+) A-I      intronic
chr4:185601589(+) A-I      intronic
chr4:185601604(+) A-I      intronic
chr4:185603603(+) A-I      intronic
chr4:185603643(+) A-I      intronic
chr4:185591949(+) A-I      intronic
chr4:185591954(+) A-I      intronic
chr4:185592940(+) A-I      intronic
chr4:185603722(+) A-I      intronic
chr4:185596742(+) A-I      intronic
chr4:185596784(+) A-I      intronic
chr4:185596785(+) A-I      intronic
chr4:185596790(+) A-I      intronic
chr4:185599865(+) A-I      intronic
chr4:185599807(+) A-I      intronic
chr4:185599750(+) A-I      intronic
chr4:185599727(+) A-I      intronic
chr4:185599705(+) A-I      intronic
chr4:185598351(+) A-I      intronic
chr4:185597390(+) A-I      intronic
chr4:185597364(+) A-I      intronic
chr4:185596892(+) A-I      intronic
chr4:185605503(+) A-I      intronic
chr4:185596864(+) A-I      intronic
chr4:185596821(+) A-I      intronic
chr4:185604541(+) A-I      intronic
chr4:185613408(+) A-I      intronic
chr4:185613403(+) A-I      intronic
chr4:185613399(+) A-I      intronic
chr4:185613378(+) A-I      intronic
chr4:185611739(+) A-I      intronic
chr4:185605535(+) A-I      intronic
chr4:185605531(+) A-I      intronic
chr4:185603699(+) A-I      intronic
chr4:185604496(+) A-I      intronic
chr4:185604488(+) A-I      intronic
chr4:185591764(+) A-I      intronic
chr4:185591734(+) A-I      intronic
chr4:185587574(+) A-I      intronic
chr4:185587561(+) A-I      intronic
chr4:185587496(+) A-I      intronic
chr4:185604417(+) A-I      intronic
chr4:185604416(+) A-I      intronic
chr4:185604365(+) A-I      intronic
chr4:185604330(+) A-I      intronic
chr4:185587478(+) A-I      intronic
chr4:185586894(+) A-I      intronic
chr4:185596886(+) A-I      intronic
chr4:185572189(+) A-I      intronic
chr4:185579092(+) A-I      intronic
chr4:185603702(+) A-I      intronic
chr4:185603582(+) A-I      intronic
chr4:185607030(+) A-I      intronic
chr4:185603940(+) A-I      intronic
chr4:185603948(+) A-I      intronic
chr4:185601442(+) A-I      intronic
chr4:185608425(+) A-I      intronic
chr4:185603631(+) A-I      intronic
chr4:185613583(+) A-I      intronic
chr4:185603577(+) A-I      intronic
chr4:185601616(+) A-I      intronic
chr4:185587542(+) A-I      intronic
chr4:185600473(+) A-I      intronic
chr4:185597361(+) A-I      intronic
chr4:185604026(+) A-I      intronic
chr4:185587538(+) A-I      intronic
chr4:185605434(+) A-I      intronic
chr4:185604491(+) A-I      intronic
chr4:185601392(+) A-I      intronic
chr4:185596729(+) A-I      intronic
chr4:185603668(+) A-I      intronic
chr4:185615097(+) A-I      intronic
chr4:185604456(+) A-I      intronic
chr4:185593036(+) A-I      intronic
chr4:185592976(+) A-I      intronic
chr4:185611753(+) A-I      intronic
chr4:185607216(+) A-I      intronic
chr4:185604001(+) A-I      intronic
chr4:185604139(+) A-I      intronic
chr4:185582698(+) A-I      intronic
chr4:185604329(+) A-I      intronic
chr4:185600467(+) A-I      intronic
chr4:185601441(+) A-I      intronic
chr4:185604430(+) A-I      intronic
chr4:185605454(+) A-I      intronic
chr4:185599944(+) A-I      intronic
chr4:185600503(+) A-I      intronic
chr4:185591977(+) A-I      intronic
chr4:185603942(+) A-I      intronic
chr4:185605490(+) A-I      intronic
chr4:185601468(+) A-I      intronic
chr4:185592971(+) A-I      intronic
chr4:185607215(+) A-I      intronic
chr4:185603641(+) A-I      intronic
chr4:185600516(+) A-I      intronic
chr4:185603765(+) A-I      intronic
chr4:185587562(+) A-I      intronic
chr4:185599943(+) A-I      intronic
chr4:185596722(+) A-I      intronic
chr4:185599721(+) A-I      intronic
chr4:185608405(+) A-I      intronic
chr4:185604124(+) A-I      intronic
chr4:185604418(+) A-I      intronic
chr4:185596882(+) A-I      intronic
chr4:185587449(+) A-I      intronic
chr4:185615058(+) A-I      intronic
chr4:185604014(+) A-I      intronic
chr4:185604105(+) A-I      intronic
chr4:185602912(+) A-I      intronic
chr4:185603567(+) A-I      intronic
chr4:185603596(+) A-I      intronic
chr4:185598379(+) A-I      intronic
chr4:185596707(+) A-I      intronic
chr4:185599762(+) A-I      intronic
chr4:185604025(+) A-I      intronic
chr4:185604321(+) A-I      intronic
chr4:185593093(+) A-I      intronic
chr4:185604526(+) A-I      intronic
chr4:185605428(+) A-I      intronic
chr4:185601397(+) A-I      intronic
chr4:185603651(+) A-I      intronic
chr4:185591899(+) A-I      intronic
chr4:185596955(+) A-I      intronic
chr4:185608354(+) A-I      intronic
chr4:185605489(+) A-I      intronic
chr4:185592977(+) A-I      intronic
chr4:185598355(+) A-I      intronic
chr4:185596737(+) A-I      intronic
chr4:185601435(+) A-I      intronic
chr4:185604028(+) A-I      intronic
chr4:185604061(+) A-I      intronic
chr4:185587572(+) A-I      intronic
chr4:185597394(+) A-I      intronic
chr4:185600476(+) A-I      intronic
chr4:185604083(+) A-I      intronic
chr4:185599786(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PRIMPOL
chr4:185570954-185570955(+) m6A 5'UTR//exon       24981863
chr4:185570962-185570963(+) m6A 5'UTR//exon       24981863
chr4:185570996-185570997(+) m6A 5'UTR//exon       24981863
chr4:185573197-185573198(+) m6A 5'UTR//exon       -
chr4:185615859-185615860(+) m6A 3'UTR//CDS//exon       24981863//22608085
chr4:185615905-185615906(+) m6A 3'UTR//CDS//exon       24981863//22608085
chr4:185615947-185615948(+) m6A 3'UTR//exon       24981863//22608085
chr4:185616024-185616025(+) m6A 3'UTR//exon       24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PRIMPOL
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: PRIMPOL

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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