Detail Information

Basic Information:


  VIRBase ID:  

VHID00039843

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 TM4SF20
miRBase
Accession/Entrez ID		 zikv-mir-4 79853
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - PRO994//SLI5//TCCE518

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TM4SF20
chr2:228227841-228227842(-) m6A 3'UTR       24981863
chr2:228227846-228227847(-) m6A 3'UTR       24981863
chr2:228227917-228227918(-) m6A 3'UTR       24981863
chr2:228227925-228227926(-) m6A 3'UTR       24981863
chr2:228228584-228228585(-) m6A CDS       24981863
chr2:228228652-228228653(-) m6A CDS       24981863
chr2:228230814-228230815(-) m6A CDS       24981863
chr2:228243856-228243857(-) m6A CDS       24981863
chr2:228243871-228243872(-) m6A CDS       24981863
chr2:228243962-228243963(-) m6A CDS       24981863//26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TM4SF20
Exosome Blood     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: TM4SF20

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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