Detail Information

Basic Information:


  VIRBase ID:  

VHID00039327

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 CWC22
miRBase
Accession/Entrez ID		 zikv-mir-4 57703
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - EIF4GL//fSAPb//NCM

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CWC22
chr2:180810955(-) A-I      intronic
chr2:180810702(-) A-I      intronic
chr2:180870216(-) A-I      intronic
chr2:180870140(-) A-I      intronic
chr2:180841862(-) A-I      intronic
chr2:180841856(-) A-I      intronic
chr2:180841637(-) A-I      intronic
chr2:180811116(-) A-I      intronic
chr2:180870221(-) A-I      intronic
chr2:180810817(-) A-I      intronic
chr2:180811029(-) A-I      intronic
chr2:180811102(-) A-I      intronic
chr2:180810747(-) A-I      intronic
chr2:180810956(-) A-I      intronic
chr2:180839653(-) A-I      intronic
chr2:180841846(-) A-I      intronic
chr2:180810706(-) A-I      intronic
chr2:180839713(-) A-I      intronic
chr2:180811056(-) A-I      intronic
chr2:180811030(-) A-I      intronic
chr2:180811083(-) A-I      intronic
chr2:180810989(-) A-I      intronic
chr2:180810777(-) A-I      intronic
chr2:180810847(-) A-I      intronic
chr2:180811156(-) A-I      intronic
chr2:180839724(-) A-I      intronic
chr2:180839643(-) A-I      intronic
chr2:180839594(-) A-I      intronic
chr2:180810787(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CWC22
chr2:180810842(-) A-G intron -    22484847
chr2:180811056(-) A-G intron -    22484847
chr2:180811156(-) A-G intron -    22484847
chr2:180841846(-) A-G intron -    22484847
chr2:180870191(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CWC22
chr2:180809664-180809665(-) m6A 3'UTR       27773535//22608085
chr2:180809785-180809786(-) m6A 3'UTR       24209618//25456834//24981863//27773535//27371828//22608085
chr2:180809809-180809810(-) m6A 3'UTR       24209618//25456834//24981863//27773535//27371828//22608085
chr2:180809831-180809832(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr2:180809836-180809837(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr2:180809864-180809865(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr2:180809892-180809893(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180809921-180809922(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180810057-180810058(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr2:180810168-180810169(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:180810222-180810223(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr2:180810284-180810285(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr2:180810310-180810311(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180810316-180810317(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180810332-180810333(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180810338-180810339(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180810353-180810354(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180810367-180810368(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180810375-180810376(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr2:180810409-180810410(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr2:180810419-180810420(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:180819715-180819716(-) m6A CDS       27773535
chr2:180819755-180819756(-) m6A CDS       27773535
chr2:180823750-180823751(-) m6A CDS       27773535
chr2:180829328-180829329(-) m6A CDS       24981863//27773535
chr2:180830672-180830673(-) m6A CDS       24981863//27773535
chr2:180830678-180830679(-) m6A CDS       24981863//27773535
chr2:180835397-180835398(-) Y CDS       26075521
chr2:180846481-180846482(-) m6A CDS       24981863
chr2:180846498-180846499(-) m6A CDS       24981863//27773535
chr2:180846594-180846595(-) m6A CDS       24981863//27773535
chr2:180846629-180846630(-) m6A CDS       24981863//27773535
chr2:180846637-180846638(-) m6A CDS       24981863//27773535
chr2:180846715-180846716(-) m6A CDS       24981863//27773535
chr2:180846721-180846722(-) m6A CDS       24981863//27773535
chr2:180851472-180851473(-) m6A CDS       24981863//27773535
chr2:180851522-180851523(-) m6A CDS       27773535
chr2:180853306-180853307(-) m6A CDS       27773535
chr2:180853321-180853322(-) m6A CDS       27773535
chr2:180853342-180853343(-) m6A CDS       27773535
chr2:180858085-180858086(-) m6A 5'UTR       24981863//27773535
chr2:180858114-180858115(-) m6A 5'UTR       24981863//27773535
chr2:180858154-180858155(-) m6A 5'UTR       24981863//27773535
chr2:180858167-180858168(-) m6A 5'UTR       24981863//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CWC22
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: CWC22

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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