Detail Information

Basic Information:


  VIRBase ID:  

VHID00039326

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 NCKAP5L
miRBase
Accession/Entrez ID		 zikv-mir-4 57701
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - Cep169//FP1193//KIAA1602

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NCKAP5L
chr12:50207766(-) A-I      intronic
chr12:50207775(-) A-I      intronic
chr12:50207774(-) A-I      intronic
chr12:50207778(-) A-I      intronic
chr12:50216510(-) A-I      intronic
chr12:50209476(-) A-I      intronic
chr12:50205501(-) A-I      intronic
chr12:50193204(-) A-I      intronic
chr12:50216558(-) A-I      intronic
chr12:50213093(-) A-I      intronic
chr12:50216399(-) A-I      intronic
chr12:50213092(-) A-I      intronic
chr12:50208183(-) A-I      intronic
chr12:50208167(-) A-I      intronic
chr12:50209540(-) A-I      intronic
chr12:50216415(-) A-I      intronic
chr12:50205449(-) A-I      intronic
chr12:50210493(-) A-I      intronic
chr12:50193169(-) A-I      intronic
chr12:50211804(-) A-I      intronic
chr12:50207403(-) A-I      intronic
chr12:50208023(-) A-I      intronic
chr12:50205462(-) A-I      intronic
chr12:50209427(-) A-I      intronic
chr12:50208038(-) A-I      intronic
chr12:50214238(-) A-I      intronic
chr12:50209545(-) A-I      intronic
chr12:50193895(-) A-I      intronic
chr12:50193366(-) A-I      intronic
chr12:50193722(-) A-I      intronic
chr12:50209461(-) A-I      intronic
chr12:50209546(-) A-I      intronic
chr12:50209500(-) A-I      intronic
chr12:50196138(-) A-I      intronic
chr12:50207376(-) A-I      intronic
chr12:50207791(-) A-I      intronic
chr12:50213019(-) A-I      intronic
chr12:50193977(-) A-I      intronic
chr12:50209490(-) A-I      intronic
chr12:50208123(-) A-I      intronic
chr12:50193349(-) A-I      intronic
chr12:50193340(-) A-I      intronic
chr12:50207578(-) A-I      intronic
chr12:50212279(-) A-I      intronic
chr12:50193121(-) A-I      intronic
chr12:50193185(-) A-I      intronic
chr12:50207583(-) A-I      intronic
chr12:50212987(-) A-I      intronic
chr12:50193734(-) A-I      intronic
chr12:50193375(-) A-I      intronic
chr12:50211874(-) A-I      intronic
chr12:50193386(-) A-I      intronic
chr12:50206194(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NCKAP5L
chr12:50208123(-) A-G intron -    22484847
chr12:50209461(-) A-G intron -    22484847
chr12:50209490(-) A-G intron -    22484847
chr12:50213019(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NCKAP5L
chr12:50185178-50185179(-) m6A 3'UTR       24284625//27773535
chr12:50185365-50185366(-) m6A 3'UTR       24284625//27773535
chr12:50185417-50185418(-) m6A 3'UTR       24284625//25456834//27371828//22608085
chr12:50185519-50185520(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50185535-50185536(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50185571-50185572(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50185576-50185577(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50185583-50185584(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50185683-50185684(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50185733-50185734(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50185820-50185821(-) m6A 3'UTR//CDS       24284625//25456834//27371828//27773536//22575960
chr12:50186004-50186005(-) m6A 3'UTR//intron       24284625
chr12:50186014-50186015(-) m6A 3'UTR//intron       24284625//27773535
chr12:50186166-50186167(-) m6A CDS//intron       24284625
chr12:50186197-50186198(-) m6A CDS//intron       24284625
chr12:50186236-50186237(-) m6A CDS       24284625
chr12:50186280-50186281(-) m6A CDS       24284625
chr12:50186317-50186318(-) m6A CDS       24284625//27773535
chr12:50186322-50186323(-) m6A CDS       24284625//27773535
chr12:50186358-50186359(-) m6A CDS       24284625//27773535
chr12:50186472-50186473(-) m6A CDS       24284625//27773535
chr12:50186670-50186671(-) m6A CDS       27773535
chr12:50186694-50186695(-) m6A CDS       27773535
chr12:50186711-50186712(-) m6A CDS       27773535
chr12:50186727-50186728(-) m6A CDS       27773535//27773536
chr12:50186741-50186742(-) m6A CDS       27773535//27773536
chr12:50186748-50186749(-) m6A CDS       27773535//27773536
chr12:50187172-50187173(-) m6A CDS       27773536
chr12:50187528-50187529(-) m6A CDS       27773536
chr12:50188550-50188551(-) m6A CDS       24284625
chr12:50188574-50188575(-) m6A CDS       24284625
chr12:50188712-50188713(-) m6A CDS       24284625//27773536
chr12:50188823-50188824(-) m6A CDS       24284625//24209618//27371828//27773536
chr12:50188847-50188848(-) m6A CDS       24284625//24209618//27371828//27773536
chr12:50189087-50189088(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189357-50189358(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189416-50189417(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189422-50189423(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189441-50189442(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189522-50189523(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189551-50189552(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189559-50189560(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189625-50189626(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189654-50189655(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189733-50189734(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189771-50189772(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50189960-50189961(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:50189969-50189970(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:50190034-50190035(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr12:50190050-50190051(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr12:50190173-50190174(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536
chr12:50190194-50190195(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536
chr12:50190304-50190305(-) m6A CDS       24284625
chr12:50190551-50190552(-) m6A CDS       24284625//24981863
chr12:50190584-50190585(-) m6A CDS       24284625//25456834//24981863//22608085
chr12:50190641-50190642(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50190662-50190663(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50190670-50190671(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50190770-50190771(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:50190805-50190806(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr12:50190836-50190837(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr12:50190934-50190935(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22608085
chr12:50191044-50191045(-) m6A CDS       24284625//25456834//24981863//27371828//27773536
chr12:50192177-50192178(-) m6A CDS       24284625//24981863//27773536
chr12:50195660-50195661(-) m6A CDS       24284625//27773535//27773536
chr12:50195691-50195692(-) m6A CDS       24284625//27773535//27773536
chr12:50196059-50196060(-) m6A exon//intron       24284625
chr12:50196858-50196859(-) m6A exon//intron       27773536
chr12:50196902-50196903(-) m6A CDS//exon       24284625//27773536
chr12:50196913-50196914(-) m6A CDS//exon       24284625//27773536
chr12:50196940-50196941(-) m6A CDS//exon       24284625//27773536
chr12:50197786-50197787(-) m6A CDS//exon       24284625
chr12:50197810-50197811(-) m6A CDS//exon       24284625
chr12:50197921-50197922(-) m6A exon//intron       24284625
chr12:50198873-50198874(-) m6A exon//intron       27773535
chr12:50222150-50222151(-) m6A 5'UTR//exon       24284625//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NCKAP5L
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: NCKAP5L

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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