Detail Information

Basic Information:


  VIRBase ID:  

VHID00038577

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 PAK1IP1
miRBase
Accession/Entrez ID		 zikv-mir-4 55003
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - bA421M1.5//hPIP1//MAK11//PIP1//WDR84

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PAK1IP1
chr6:10701484(+) A-I      intronic
chr6:10700525(+) A-I      intronic
chr6:10701409(+) A-I      intronic
chr6:10700392(+) A-I      intronic
chr6:10701451(+) A-I      intronic
chr6:10700409(+) A-I      intronic
chr6:10701384(+) A-I      intronic
chr6:10701427(+) A-I      intronic
chr6:10698030(+) A-I      intronic
chr6:10700526(+) A-I      intronic
chr6:10704532(+) A-I      intronic
chr6:10705286(+) A-I      intronic
chr6:10698068(+) A-I      intronic
chr6:10703120(+) A-I      intronic
chr6:10702398(+) A-I      intronic
chr6:10701532(+) A-I      intronic
chr6:10705289(+) A-I      intronic
chr6:10699326(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PAK1IP1
chr6:10705003(+) A-G exon CDS    21725310
chr6:10701350(+) A-G intron -    22484847
chr6:10703120(+) A-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PAK1IP1
chr6:10697562-10697563(+) m6A CDS       24284625//24981863//22575960
chr6:10703685-10703686(+) m6A CDS       24981863
chr6:10704805-10704806(+) m6A CDS       24981863
chr6:10709216-10709217(+) m6A CDS       27773535
chr6:10709255-10709256(+) m6A CDS       24981863//27773535
chr6:10709267-10709268(+) m6A CDS       24981863//27773535
chr6:10709480-10709481(+) m6A CDS       24981863//27773535//22608085
chr6:10709543-10709544(+) m6A CDS       24209618//24981863//27773535//22608085
chr6:10709673-10709674(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr6:10709707-10709708(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr6:10709813-10709814(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PAK1IP1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: PAK1IP1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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