Detail Information

Basic Information:


  VIRBase ID:  

VHID00038545

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 RHBDL2
miRBase
Accession/Entrez ID		 zikv-mir-4 54933
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - RRP2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RHBDL2
chr1:39376626(-) A-I      intronic
chr1:39376624(-) A-I      intronic
chr1:39376618(-) A-I      intronic
chr1:39376615(-) A-I      intronic
chr1:39355947(-) A-I      intronic
chr1:39376589(-) A-I      intronic
chr1:39376630(-) A-I      intronic
chr1:39376633(-) A-I      intronic
chr1:39376693(-) A-I      intronic
chr1:39376723(-) A-I      intronic
chr1:39351790(-) A-I      3'UTR
chr1:39351827(-) A-I      3'UTR
chr1:39351829(-) A-I      3'UTR
chr1:39351839(-) A-I      3'UTR
chr1:39376629(-) A-I      intronic
chr1:39367966(-) A-I      intronic
chr1:39367985(-) A-I      intronic
chr1:39353276(-) A-I      intronic
chr1:39367980(-) A-I      intronic
chr1:39367970(-) A-I      intronic
chr1:39353273(-) A-I      intronic
chr1:39367940(-) A-I      intronic
chr1:39353279(-) A-I      intronic
chr1:39377489(-) A-I      intronic
chr1:39377681(-) A-I      intronic
chr1:39377733(-) A-I      intronic
chr1:39372206(-) A-I      intronic
chr1:39370805(-) A-I      intronic
chr1:39368505(-) A-I      intronic
chr1:39368497(-) A-I      intronic
chr1:39351844(-) A-I      3'UTR
chr1:39351787(-) A-I      3'UTR
chr1:39351845(-) A-I      3'UTR
chr1:39351833(-) A-I      3'UTR
chr1:39351853(-) A-I      3'UTR
chr1:39390646(-) A-I      intronic
chr1:39398405(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RHBDL2
chr1:39386917(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RHBDL2
chr1:39352009-39352010(-) m6A 3'UTR       -
chr1:39352041-39352042(-) m6A 3'UTR       -
chr1:39352051-39352052(-) m6A 3'UTR       -
chr1:39352056-39352057(-) m6A 3'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RHBDL2
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: RHBDL2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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