Detail Information

Basic Information:


  VIRBase ID:  

VHID00037415

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 GRIP1
miRBase
Accession/Entrez ID		 zikv-mir-4 23426
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - FRASRS3//GRIP

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GRIP1
chr12:66851312(-) A-I      intronic
chr12:66852338(-) A-I      intronic
chr12:66757057(-) A-I      intronic
chr12:66773883(-) A-I      intronic
chr12:66852329(-) A-I      intronic
chr12:67029135(-) A-I      intronic
chr12:66780225(-) A-I      intronic
chr12:66901689(-) A-I      intronic
chr12:66922122(-) A-I      intronic
chr12:66773865(-) A-I      intronic
chr12:67037481(-) A-I      intronic
chr12:66779105(-) A-I      intronic
chr12:66851254(-) A-I      intronic
chr12:66901702(-) A-I      intronic
chr12:66856548(-) A-I      intronic
chr12:66856499(-) A-I      intronic
chr12:66757230(-) A-I      intronic
chr12:66901613(-) A-I      intronic
chr12:66785369(-) A-I      intronic
chr12:66829243(-) A-I      intronic
chr12:67058836(-) A-I      intronic
chr12:66787097(-) A-I      intronic
chr12:66832382(-) A-I      intronic
chr12:66773914(-) A-I      intronic
chr12:66940187(-) A-I      intronic
chr12:66752324(-) A-I      intronic
chr12:66790885(-) A-I      intronic
chr12:66836205(-) A-I      intronic
chr12:66932088(-) A-I      intronic
chr12:66837482(-) A-I      intronic
chr12:67049564(-) A-I      intronic
chr12:66852333(-) A-I      intronic
chr12:66852305(-) A-I      intronic
chr12:66845322(-) A-I      intronic
chr12:66787138(-) A-I      intronic
chr12:66765214(-) A-I      intronic
chr12:66779150(-) A-I      intronic
chr12:66845324(-) A-I      intronic
chr12:66757290(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED GRIP1
chr12:66743598(-) G-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GRIP1
chr12:66742769-66742770(-) m6A 3'UTR       24981863//22608085
chr12:66742776-66742777(-) m6A 3'UTR       24981863//22608085
chr12:66742816-66742817(-) m6A 3'UTR//CDS       24209618//24981863//22608085
chr12:66742824-66742825(-) m6A 3'UTR//CDS       24209618//24981863//22608085
chr12:66742868-66742869(-) m6A 3'UTR//CDS       24209618//24981863//22608085
chr12:66742873-66742874(-) m6A 3'UTR//CDS       24209618//24981863//22608085
chr12:66742904-66742905(-) m6A 3'UTR//CDS       24981863//22608085
chr12:66742931-66742932(-) m6A 3'UTR//CDS       24981863//22608085
chr12:66742949-66742950(-) m6A 3'UTR//CDS       24981863//22608085
chr12:66743003-66743004(-) m6A CDS//exon       24981863//22608085
chr12:66743010-66743011(-) m6A CDS//exon       24981863//22608085
chr12:66849974-66849975(-) m6A 3'UTR//CDS//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GRIP1
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: GRIP1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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