Detail Information

Basic Information:


  VIRBase ID:  

VHID00036916

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 CCNI
miRBase
Accession/Entrez ID		 zikv-mir-4 10983
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CCNI1//CYC1//CYI

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CCNI
chr4:77976428(-) A-I      NonSyn:Met->Val
chr4:77986020(-) A-I      ncRNA
chr4:77986075(-) A-I      ncRNA
chr4:77986046(-) A-I      ncRNA
chr4:77986025(-) A-I      ncRNA
chr4:77986008(-) A-I      ncRNA
chr4:77986002(-) A-I      ncRNA
chr4:77976433(-) A-I      NonSyn:His->Arg
chr4:77985969(-) A-I      ncRNA
chr4:77976405(-) A-I      Syn:Gln->Gln
chr4:77985965(-) A-I      ncRNA
chr4:77985948(-) A-I      ncRNA
chr4:77976371(-) A-I      NonSyn:Ser->Gly
chr4:77985918(-) A-I      ncRNA
chr4:77976418(-) A-I      NonSyn:Asn->Ser
chr4:77987027(-) A-I      intronic
chr4:77987192(-) A-I      intronic
chr4:77987207(-) A-I      intronic
chr4:77988752(-) A-I      intronic
chr4:77988755(-) A-I      intronic
chr4:77985339(-) A-I      intronic
chr4:77985357(-) A-I      intronic
chr4:77987070(-) A-I      intronic
chr4:77987130(-) A-I      intronic
chr4:77987132(-) A-I      intronic
chr4:77987168(-) A-I      intronic
chr4:77987171(-) A-I      intronic
chr4:77987210(-) A-I      intronic
chr4:77991243(-) A-I      intronic
chr4:77991268(-) A-I      intronic
chr4:77991273(-) A-I      intronic
chr4:77982891(-) A-I      intronic
chr4:77982899(-) A-I      intronic
chr4:77980681(-) A-I      intronic
chr4:77991287(-) A-I      intronic
chr4:77980333(-) A-I      intronic
chr4:77983502(-) A-I      intronic
chr4:77983499(-) A-I      intronic
chr4:77985232(-) A-I      intronic
chr4:77983515(-) A-I      intronic
chr4:77980348(-) A-I      intronic
chr4:77980354(-) A-I      intronic
chr4:77980656(-) A-I      intronic
chr4:77980670(-) A-I      intronic
chr4:77983027(-) A-I      intronic
chr4:77980689(-) A-I      intronic
chr4:77980699(-) A-I      intronic
chr4:77980755(-) A-I      intronic
chr4:77980763(-) A-I      intronic
chr4:77976668(-) A-I      intronic
chr4:77976708(-) A-I      intronic
chr4:77976768(-) A-I      intronic
chr4:77976790(-) A-I      intronic
chr4:77977832(-) A-I      intronic
chr4:77977854(-) A-I      intronic
chr4:77983601(-) A-I      intronic
chr4:77986996(-) A-I      intronic
chr4:77987197(-) A-I      intronic
chr4:77977950(-) A-I      intronic
chr4:77980787(-) A-I      intronic
chr4:77985229(-) A-I      intronic
chr4:77985223(-) A-I      intronic
chr4:77985215(-) A-I      intronic
chr4:77985178(-) A-I      intronic
chr4:77984705(-) A-I      intronic
chr4:77982947(-) A-I      intronic
chr4:77978011(-) A-I      intronic
chr4:77984675(-) A-I      intronic
chr4:77978017(-) A-I      intronic
chr4:77984661(-) A-I      intronic
chr4:77984653(-) A-I      intronic
chr4:77980795(-) A-I      intronic
chr4:77978025(-) A-I      intronic
chr4:77979283(-) A-I      intronic
chr4:77979291(-) A-I      intronic
chr4:77979422(-) A-I      intronic
chr4:77981915(-) A-I      intronic
chr4:77981923(-) A-I      intronic
chr4:77981924(-) A-I      intronic
chr4:77976884(-) A-I      intronic
chr4:77982920(-) A-I      intronic
chr4:77976788(-) A-I      intronic
chr4:77982934(-) A-I      intronic
chr4:77976813(-) A-I      intronic
chr4:77983028(-) A-I      intronic
chr4:77982951(-) A-I      intronic
chr4:77983006(-) A-I      intronic
chr4:77983088(-) A-I      intronic
chr4:77982997(-) A-I      intronic
chr4:77976748(-) A-I      intronic
chr4:77976784(-) A-I      intronic
chr4:77986005(-) A-I      ncRNA
chr4:77976793(-) A-I      intronic
chr4:77976744(-) A-I      intronic
chr4:77977864(-) A-I      intronic
chr4:77982990(-) A-I      intronic
chr4:77982987(-) A-I      intronic
chr4:77976757(-) A-I      intronic
chr4:77985929(-) A-I      ncRNA
chr4:77988736(-) A-I      intronic
chr4:77985930(-) A-I      ncRNA
chr4:77977878(-) A-I      intronic
chr4:77983017(-) A-I      intronic
chr4:77983101(-) A-I      intronic
chr4:77985900(-) A-I      ncRNA
chr4:77976824(-) A-I      intronic
chr4:77985944(-) A-I      ncRNA
chr4:77982991(-) A-I      intronic
chr4:77982961(-) A-I      intronic
chr4:77988130(-) A-I      intronic
chr4:77976852(-) A-I      intronic
chr4:77976847(-) A-I      intronic
chr4:77976833(-) A-I      intronic
chr4:77983000(-) A-I      intronic
chr4:77982992(-) A-I      intronic
chr4:77987087(-) A-I      intronic
chr4:77985333(-) A-I      intronic
chr4:77989222(-) A-I      intronic
chr4:77985313(-) A-I      intronic
chr4:77989248(-) A-I      intronic
chr4:77982059(-) A-I      intronic
chr4:77985151(-) A-I      intronic
chr4:77985176(-) A-I      intronic
chr4:77987002(-) A-I      intronic
chr4:77981916(-) A-I      intronic
chr4:77989150(-) A-I      intronic
chr4:77983661(-) A-I      intronic
chr4:77977973(-) A-I      intronic
chr4:77988772(-) A-I      intronic
chr4:77982955(-) A-I      intronic
chr4:77981799(-) A-I      intronic
chr4:77990319(-) A-I      intronic
chr4:77982078(-) A-I      intronic
chr4:77976798(-) A-I      intronic
chr4:77988887(-) A-I      intronic
chr4:77988854(-) A-I      intronic
chr4:77987167(-) A-I      intronic
chr4:77987202(-) A-I      intronic
chr4:77985173(-) A-I      intronic
chr4:77983596(-) A-I      intronic
chr4:77988699(-) A-I      intronic
chr4:77987240(-) A-I      intronic
chr4:77985296(-) A-I      intronic
chr4:77984678(-) A-I      intronic
chr4:77979399(-) A-I      intronic
chr4:77979336(-) A-I      intronic
chr4:77976799(-) A-I      intronic
chr4:77991309(-) A-I      intronic
chr4:77987008(-) A-I      intronic
chr4:77985284(-) A-I      intronic
chr4:77988693(-) A-I      intronic
chr4:77984589(-) A-I      intronic
chr4:77991225(-) A-I      intronic
chr4:77970797(-) A-I      intronic
chr4:77987056(-) A-I      intronic
chr4:77983516(-) A-I      intronic
chr4:77985150(-) A-I      intronic
chr4:77990406(-) A-I      intronic
chr4:77977858(-) A-I      intronic
chr4:77979342(-) A-I      intronic
chr4:77988782(-) A-I      intronic
chr4:77979245(-) A-I      intronic
chr4:77977940(-) A-I      intronic
chr4:77976683(-) A-I      intronic
chr4:77988302(-) A-I      intronic
chr4:77989250(-) A-I      intronic
chr4:77989218(-) A-I      intronic
chr4:77983547(-) A-I      intronic
chr4:77988740(-) A-I      intronic
chr4:77990327(-) A-I      intronic
chr4:77983517(-) A-I      intronic
chr4:77987159(-) A-I      intronic
chr4:77976823(-) A-I      intronic
chr4:77976796(-) A-I      intronic
chr4:77979380(-) A-I      intronic
chr4:77970659(-) A-I      intronic
chr4:77987191(-) A-I      intronic
chr4:77983094(-) A-I      intronic
chr4:77979396(-) A-I      intronic
chr4:77989209(-) A-I      intronic
chr4:77977871(-) A-I      intronic
chr4:77989080(-) A-I      intronic
chr4:77988811(-) A-I      intronic
chr4:77977946(-) A-I      intronic
chr4:77982919(-) A-I      intronic
chr4:77985160(-) A-I      intronic
chr4:77981756(-) A-I      intronic
chr4:77977881(-) A-I      intronic
chr4:77981873(-) A-I      intronic
chr4:77981713(-) A-I      intronic
chr4:77985925(-) A-I      ncRNA
chr4:77986106(-) A-I      ncRNA
chr4:77986011(-) A-I      ncRNA
chr4:77986000(-) A-I      ncRNA
chr4:77986065(-) A-I      ncRNA
chr4:77985996(-) A-I      ncRNA
chr4:77985939(-) A-I      ncRNA
chr4:77986026(-) A-I      ncRNA
chr4:77986010(-) A-I      ncRNA
chr4:77986007(-) A-I      ncRNA
chr4:77986083(-) A-I      ncRNA
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CCNI
chr4:77979680(-) A-I exon CDS    19478186   //21960545
chr4:77983094(-) A-I intron -    22028664   //22327324
chr4:77976744(-) A-I intron -    22028664
chr4:77976748(-) A-I intron -    22028664
chr4:77976757(-) A-I intron -    22028664
chr4:77976784(-) A-I intron -    22028664
chr4:77976788(-) A-I intron -    22028664
chr4:77976793(-) A-I intron -    22028664
chr4:77976796(-) A-I intron -    22028664
chr4:77976813(-) A-I intron -    22028664
chr4:77976823(-) A-I intron -    22028664
chr4:77976824(-) A-I intron -    22028664
chr4:77976833(-) A-I intron -    22028664
chr4:77976847(-) A-I intron -    22028664
chr4:77976852(-) A-I intron -    22028664
chr4:77976884(-) A-I intron -    22028664
chr4:77982919(-) A-I intron -    22028664
chr4:77982920(-) A-I intron -    22028664
chr4:77982934(-) A-I intron -    22028664
chr4:77982951(-) A-I intron -    22028664
chr4:77982955(-) A-I intron -    22028664
chr4:77982961(-) A-I intron -    22028664
chr4:77982987(-) A-I intron -    22028664
chr4:77982990(-) A-I intron -    22028664
chr4:77982991(-) A-I intron -    22028664
chr4:77982992(-) A-I intron -    22028664
chr4:77982997(-) A-I intron -    22028664
chr4:77983000(-) A-I intron -    22028664
chr4:77983006(-) A-I intron -    22028664
chr4:77983017(-) A-I intron -    22028664
chr4:77983028(-) A-I intron -    22028664
chr4:77983088(-) A-I intron -    22028664
chr4:77983095(-) A-I intron -    22028664
chr4:77983101(-) A-I intron -    22028664
chr4:77980220(-) A-I intron -    21960545
chr4:77987056(-) A-I intron -    21960545
chr4:77997047(-) C-T intron -    21725310
chr4:77976617(-) G-A intron -    22484847
chr4:77977878(-) A-G intron -    22484847
chr4:77977946(-) A-G intron -    22484847
chr4:77977973(-) A-G intron -    22484847
chr4:77982955(-) A-G intron -    22484847
chr4:77983094(-) A-G intron -    22484847
chr4:77983596(-) A-G intron -    22484847
chr4:77983651(-) A-G intron -    22484847
chr4:77985150(-) A-G intron -    22484847
chr4:77985151(-) A-G intron -    22484847
chr4:77985173(-) A-G intron -    22484847
chr4:77986011(-) A-G intron -    22484847
chr4:77986014(-) A-G intron -    22484847
chr4:77987008(-) A-G intron -    22484847
chr4:77987056(-) A-G intron -    22484847
chr4:77987096(-) A-G intron -    22484847
chr4:77987191(-) A-G intron -    22484847
chr4:77987202(-) A-G intron -    22484847
chr4:77987240(-) A-G intron -    22484847
chr4:77988746(-) A-G intron -    22484847
chr4:77988817(-) C-A intron -    22484847
chr4:77989080(-) A-G intron -    22484847
chr4:77991308(-) A-G intron -    22484847
chr4:77991309(-) A-G intron -    22484847
chr4:77993659(-) T-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CCNI
chr4:77968552-77968553(-) m6A 3'UTR       26404942
chr4:77968622-77968623(-) m6A 3'UTR       26404942
chr4:77968913-77968914(-) m6A 3'UTR       26404942
chr4:77968959-77968960(-) m6A 3'UTR       26404942
chr4:77969134-77969135(-) m6A 3'UTR       26404942
chr4:77969145-77969146(-) m6A 3'UTR       26404942
chr4:77969180-77969181(-) m6A 3'UTR       24981863//26404942
chr4:77969234-77969235(-) m6A 3'UTR       24981863//26404942
chr4:77969308-77969309(-) Am 3'UTR       -
chr4:77969314-77969315(-) m6A 3'UTR       24981863//26404942
chr4:77969332-77969333(-) m6A 3'UTR       24981863//26404942
chr4:77969342-77969343(-) m6A 3'UTR       24981863//26404942
chr4:77969416-77969417(-) m6A CDS       24981863//26404942
chr4:77969425-77969426(-) m6A CDS       24981863//26404942
chr4:77969550-77969551(-) m6A CDS       24981863//26404942
chr4:77969630-77969631(-) m6A CDS       24981863//26404942//22575960
chr4:77969642-77969643(-) m6A CDS       24981863//26404942//22575960
chr4:77977189-77977190(-) Gm 3'UTR//CDS//exon       -
chr4:77979709-77979710(-) m6A CDS//exon//intron       -
chr4:77979740-77979741(-) m6A CDS//exon//intron       -
chr4:77985928-77985929(-) m6A exon//intron       -
chr4:77995963-77995964(-) m6A 5'UTR//intron       24981863
chr4:77996429-77996430(-) m6A 5'UTR//intron       24981863
chr4:77996465-77996466(-) m6A 5'UTR//intron       24981863
chr4:77996866-77996867(-) m6A 5'UTR       27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CCNI
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: CCNI

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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