Detail Information

Basic Information:


  VIRBase ID:  

VHID00036887

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 MAGED2
miRBase
Accession/Entrez ID		 zikv-mir-4 10916
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - 11B6//BARTS5//BCG-1//BCG1//HCA10//MAGE-D2

RNA Editing:


Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MAGED2
chrX:54842324(+) T-C intron -    21725310

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MAGED2
chrX:54834180-54834181(+) m6A 5'UTR       24284625//25456834//24981863
chrX:54834192-54834193(+) m6A 5'UTR//exon       24284625//25456834//24981863
chrX:54834218-54834219(+) m6A 5'UTR//exon       24284625//25456834//24981863
chrX:54834230-54834231(+) m6A 5'UTR//exon       24284625//25456834//24981863
chrX:54834775-54834776(+) m6A 5'UTR//intron       -
chrX:54835574-54835575(+) m6A 5'UTR//exon//intron       24284625//25456834//24981863
chrX:54835645-54835646(+) m6A 5'UTR//exon//intron       24284625//25456834//24981863
chrX:54835762-54835763(+) m6A 5'UTR//exon       24981863
chrX:54836173-54836174(+) m6A CDS//exon//intron       24981863
chrX:54836193-54836194(+) m6A CDS//exon//intron       24981863
chrX:54836232-54836233(+) m6A CDS//exon//intron       -
chrX:54837409-54837410(+) m6A CDS//exon//intron       24284625//25456834//24981863
chrX:54841865-54841866(+) m6A CDS       25456834//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MAGED2
Chromatin HCC cell line (HepG2)     -
Exosome Blood     -
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: MAGED2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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