Detail Information

Basic Information:


  VIRBase ID:  

VHID00036602

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 CNKSR1
miRBase
Accession/Entrez ID		 zikv-mir-4 10256
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CNK//CNK1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CNKSR1
chr1:26507724(+) A-I      intronic
chr1:26507707(+) A-I      intronic
chr1:26507727(+) A-I      intronic
chr1:26507713(+) A-I      intronic
chr1:26512090(+) A-I      intronic
chr1:26513239(+) A-I      intronic
chr1:26512065(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CNKSR1
chr1:26504005-26504006(+) m6A 5'UTR//exon       25456834
chr1:26504043-26504044(+) m6A CDS//exon       25456834
chr1:26504053-26504054(+) m6A CDS//exon       25456834
chr1:26504059-26504060(+) m6A CDS//exon       25456834
chr1:26515800-26515801(+) m1A 3'UTR//CDS       26863196
chr1:26515945-26515946(+) m6A 3'UTR//CDS       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CNKSR1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: CNKSR1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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