Detail Information

Basic Information:


  VIRBase ID:  

VHID00036535

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 ARL4A
miRBase
Accession/Entrez ID		 zikv-mir-4 10124
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - ARL4

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ARL4A
chr7:12726489-12726490(+) m6A 5'UTR       24981863
chr7:12726596-12726597(+) m6A 5'UTR       24981863
chr7:12727198-12727199(+) m6A 5'UTR//intron       24981863
chr7:12727332-12727333(+) m6A 5'UTR//intron       24284625//24981863//27773535
chr7:12727338-12727339(+) m6A 5'UTR//intron       24284625//24981863//27773535
chr7:12727829-12727830(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr7:12727859-12727860(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12727898-12727899(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12727903-12727904(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12727964-12727965(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr7:12727978-12727979(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr7:12728080-12728081(+) m6A CDS       24981863//22608085
chr7:12728180-12728181(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12728215-12728216(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12728220-12728221(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12728283-12728284(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12728297-12728298(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12728343-12728344(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr7:12728412-12728413(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr7:12728421-12728422(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr7:12728609-12728610(+) m6A 3'UTR       24981863
chr7:12728748-12728749(+) m6A 3'UTR       24981863//27773535//22608085
chr7:12728788-12728789(+) m6A 3'UTR       24981863//27773535//22608085
chr7:12729278-12729279(+) m6A 3'UTR       24981863//22608085
chr7:12729321-12729322(+) m6A 3'UTR       24981863//22608085
chr7:12729596-12729597(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ARL4A
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: ARL4A

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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