Detail Information

Basic Information:


  VIRBase ID:  

VHID00036230

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 PRDX6
miRBase
Accession/Entrez ID		 zikv-mir-4 9588
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - 1-Cys//aiPLA2//AOP2//HEL-S-128m//LPCAT-5//NSGPx//p29//PRX

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PRDX6
chr1:173453022(+) A-I      intronic
chr1:173452993(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PRDX6
chr1:173446466-173446467(+) m6A 5'UTR       24284625//24981863//22575960
chr1:173446487-173446488(+) m6A 5'UTR//exon       24284625//24981863//22575960
chr1:173446627-173446628(+) m6A CDS//exon       24981863//22575960
chr1:173457077-173457078(+) m6A 3'UTR//exon       27773535
chr1:173457636-173457637(+) m6A 3'UTR       27773535
chr1:173457781-173457782(+) Y 3'UTR       26075521
chr1:173457869-173457870(+) m6A 3'UTR       27773535
chr1:173457917-173457918(+) m6A 3'UTR       27773535
chr1:173457940-173457941(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PRDX6
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: PRDX6

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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