Detail Information

Basic Information:


  VIRBase ID:  

VHID00035394

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 TM7SF2
miRBase
Accession/Entrez ID		 zikv-mir-4 7108
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - ANG1//C14SR//DHCR14A//NET47

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TM7SF2
chr11:64879484-64879485(+) m6A 5'UTR//exon//intron       -
chr11:64879560-64879561(+) m6A exon//intron       -
chr11:64879602-64879603(+) m6A exon//intron       -
chr11:64879661-64879662(+) m6A exon//intron       25456834
chr11:64879795-64879796(+) m6A exon//intron       25456834
chr11:64879820-64879821(+) m6A exon//intron       25456834
chr11:64881041-64881042(+) m6A 3'UTR//CDS//exon//intron       -
chr11:64883583-64883584(+) m6A 3'UTR//exon       24981863//27773535//22608085
chr11:64883607-64883608(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085
chr11:64883644-64883645(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085
chr11:64883688-64883689(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085
chr11:64883730-64883731(+) m6A 3'UTR       25456834//24981863//22608085
chr11:64883739-64883740(+) m6A 3'UTR       25456834//24981863//22608085
chr11:64883766-64883767(+) m6A 3'UTR       25456834//24981863//22608085
chr11:64883840-64883841(+) m6A 3'UTR       25456834//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TM7SF2
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HCC cell line (HepG2)     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: TM7SF2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...