Detail Information

Basic Information:


  VIRBase ID:  

VHID00034465

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 NFKB2
miRBase
Accession/Entrez ID		 zikv-mir-4 4791
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CVID10//H2TF1//LYT-10//LYT10//NF-kB2//p100//p49/p100//p52

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NFKB2
chr10:104158916(+) A-I      ncRNA
chr10:104158736(+) A-I      ncRNA

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NFKB2
chr10:104154375-104154376(+) m6A 5'UTR//intron       24981863
chr10:104154392-104154393(+) m6A 5'UTR//intron       24981863
chr10:104154425-104154426(+) m6A 5'UTR//intron       24981863
chr10:104154527-104154528(+) m6A 5'UTR//intron       24981863
chr10:104155536-104155537(+) m6A 5'UTR//exon//intron       24981863
chr10:104155558-104155559(+) m6A 5'UTR//intron       24981863
chr10:104155672-104155673(+) m6A 5'UTR//exon       24981863
chr10:104155691-104155692(+) m6A 5'UTR//exon       24981863
chr10:104157107-104157108(+) m6A CDS//exon       26404942
chr10:104157121-104157122(+) m6A CDS//exon       26404942
chr10:104157320-104157321(+) m6A CDS//exon       -
chr10:104157755-104157756(+) m6A CDS//exon       -
chr10:104157776-104157777(+) m6A CDS//exon       -
chr10:104157781-104157782(+) m6A CDS//exon       -
chr10:104158025-104158026(+) m6A CDS//exon       -
chr10:104158050-104158051(+) m6A CDS//exon       -
chr10:104158159-104158160(+) m6A CDS//exon       -
chr10:104158251-104158252(+) m6A CDS//exon       24209618
chr10:104158770-104158771(+) m6A 3'UTR//exon//intron       -
chr10:104158962-104158963(+) m6A 3'UTR//exon//intron       24209618
chr10:104159170-104159171(+) m6A CDS//exon       24209618//27371828
chr10:104159211-104159212(+) m6A CDS//exon       24209618//27371828
chr10:104159433-104159434(+) m6A CDS//exon       24209618//22575960
chr10:104159461-104159462(+) Gm CDS//exon       -
chr10:104159471-104159472(+) m6A CDS//exon       -
chr10:104159759-104159760(+) m6A exon//intron       -
chr10:104159814-104159815(+) m6A exon//intron       -
chr10:104159867-104159868(+) m6A CDS       -
chr10:104159913-104159914(+) m6A CDS       -
chr10:104160412-104160413(+) m6A CDS//exon       24284625
chr10:104160474-104160475(+) m6A CDS//exon       24284625
chr10:104160518-104160519(+) m6A CDS//exon       24284625
chr10:104161817-104161818(+) m6A CDS       -
chr10:104161891-104161892(+) m6A CDS       24284625
chr10:104161898-104161899(+) m6A CDS       24284625
chr10:104162023-104162024(+) m6A CDS       24284625//24981863
chr10:104162163-104162164(+) m6A 3'UTR       24284625
chr10:104162231-104162232(+) m6A 3'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NFKB2
Chromatin K562 cells     -
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: NFKB2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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