Detail Information

Basic Information:


  VIRBase ID:  

VHID00034406

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 MYL5
miRBase
Accession/Entrez ID		 zikv-mir-4 4636
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - MYLC2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MYL5
chr4:667421-667422(+) m6A 5'UTR       -
chr4:667427-667428(+) m6A 5'UTR       -
chr4:667443-667444(+) m6A 5'UTR       -
chr4:667457-667458(+) m6A 5'UTR       -
chr4:667733-667734(+) m6A 5'UTR       -
chr4:667951-667952(+) m6A 5'UTR//intron       24981863
chr4:668016-668017(+) m6A 5'UTR//intron       24981863
chr4:668419-668420(+) m6A 5'UTR//exon//intron       25456834//27371828
chr4:668505-668506(+) m6A 5'UTR//intron       25456834//27371828
chr4:668537-668538(+) m6A 5'UTR//intron       25456834//27371828
chr4:668799-668800(+) m6A 5'UTR//intron       24284625//25456834//27371828
chr4:668851-668852(+) m6A 5'UTR//intron       24284625//25456834//27371828
chr4:668892-668893(+) m6A 5'UTR//intron       24284625//25456834//27371828
chr4:669036-669037(+) m6A 5'UTR//intron       24284625//25456834//27371828
chr4:669219-669220(+) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//22608085
chr4:669256-669257(+) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//22608085
chr4:669264-669265(+) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//22608085
chr4:669288-669289(+) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//22608085
chr4:669393-669394(+) m6A 5'UTR//intron       24284625//25456834//27371828
chr4:669479-669480(+) m6A 5'UTR//intron       24284625//25456834
chr4:669507-669508(+) m6A 5'UTR//intron       -
chr4:669601-669602(+) m6A 5'UTR//intron       -
chr4:670166-670167(+) m6A exon//intron       24284625
chr4:670178-670179(+) m6A exon//intron       24284625
chr4:670198-670199(+) m6A exon//intron       24284625
chr4:670218-670219(+) m6A exon//intron       -
chr4:671731-671732(+) m6A 5'UTR//intron       -
chr4:671744-671745(+) m6A 5'UTR//intron       -
chr4:671771-671772(+) m6A 5'UTR//intron       -
chr4:672112-672113(+) m6A 5'UTR//intron       24284625//25456834
chr4:672252-672253(+) m6A 5'UTR//intron       25456834
chr4:672379-672380(+) m6A 5'UTR//intron       25456834
chr4:672418-672419(+) m6A 5'UTR//intron       -
chr4:672458-672459(+) m6A 5'UTR//CDS       -
chr4:672530-672531(+) m6A 5'UTR//CDS       -
chr4:672768-672769(+) m6A CDS       -
chr4:672795-672796(+) m6A CDS       -
chr4:672804-672805(+) m6A CDS       -
chr4:672866-672867(+) m6A CDS//intron       -
chr4:674736-674737(+) m6A exon//intron       -
chr4:675685-675686(+) m6A 3'UTR//CDS//exon       -
chr4:675730-675731(+) m6A 3'UTR//CDS//exon       -
chr4:675784-675785(+) m6A 3'UTR//exon       -
chr4:675802-675803(+) m6A 3'UTR//exon       -
chr4:675816-675817(+) m6A 3'UTR//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MYL5
Exosome Blood     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: MYL5

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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