Detail Information

Basic Information:


  VIRBase ID:  

VHID00034084

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 ISG20
miRBase
Accession/Entrez ID		 zikv-mir-4 3669
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CD25//HEM45

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ISG20
chr15:89184992(+) A-I      intronic
chr15:89185002(+) A-I      intronic
chr15:89186254(+) A-I      intronic
chr15:89186314(+) A-I      intronic
chr15:89185004(+) A-I      intronic
chr15:89186369(+) A-I      intronic
chr15:89187548(+) A-I      intronic
chr15:89187589(+) A-I      intronic
chr15:89184963(+) A-I      intronic
chr15:89184962(+) A-I      intronic
chr15:89184956(+) A-I      intronic
chr15:89184927(+) A-I      intronic
chr15:89184349(+) A-I      intronic
chr15:89184316(+) A-I      intronic
chr15:89184139(+) A-I      intronic
chr15:89186876(+) A-I      intronic
chr15:89187613(+) A-I      intronic
chr15:89184117(+) A-I      intronic
chr15:89184008(+) A-I      intronic
chr15:89183996(+) A-I      intronic
chr15:89187625(+) A-I      intronic
chr15:89187652(+) A-I      intronic
chr15:89187665(+) A-I      intronic
chr15:89187774(+) A-I      intronic
chr15:89185239(+) A-I      intronic
chr15:89186313(+) A-I      intronic
chr15:89190021(+) A-I      intronic
chr15:89186245(+) A-I      intronic
chr15:89185123(+) A-I      intronic
chr15:89186206(+) A-I      intronic
chr15:89190076(+) A-I      intronic
chr15:89190095(+) A-I      intronic
chr15:89190101(+) A-I      intronic
chr15:89190102(+) A-I      intronic
chr15:89190105(+) A-I      intronic
chr15:89186191(+) A-I      intronic
chr15:89186109(+) A-I      intronic
chr15:89186028(+) A-I      intronic
chr15:89186000(+) A-I      intronic
chr15:89185948(+) A-I      intronic
chr15:89185891(+) A-I      intronic
chr15:89185867(+) A-I      intronic
chr15:89185394(+) A-I      intronic
chr15:89186860(+) A-I      intronic
chr15:89186828(+) A-I      intronic
chr15:89186758(+) A-I      intronic
chr15:89186736(+) A-I      intronic
chr15:89186734(+) A-I      intronic
chr15:89186673(+) A-I      intronic
chr15:89186884(+) A-I      intronic
chr15:89186895(+) A-I      intronic
chr15:89186411(+) A-I      intronic
chr15:89186407(+) A-I      intronic
chr15:89186045(+) A-I      intronic
chr15:89186121(+) A-I      intronic
chr15:89185343(+) A-I      intronic
chr15:89186056(+) A-I      intronic
chr15:89186815(+) A-I      intronic
chr15:89185941(+) A-I      intronic
chr15:89183993(+) A-I      intronic
chr15:89184019(+) A-I      intronic
chr15:89184478(+) A-I      intronic
chr15:89184465(+) A-I      intronic
chr15:89186415(+) A-I      intronic
chr15:89186777(+) A-I      intronic
chr15:89186310(+) A-I      intronic
chr15:89183940(+) A-I      intronic
chr15:89183937(+) A-I      intronic
chr15:89187603(+) A-I      intronic
chr15:89186200(+) A-I      intronic
chr15:89185011(+) A-I      intronic
chr15:89187614(+) A-I      intronic
chr15:89185928(+) A-I      intronic
chr15:89186269(+) A-I      intronic
chr15:89185327(+) A-I      intronic
chr15:89186784(+) A-I      intronic
chr15:89186788(+) A-I      intronic
chr15:89187669(+) A-I      intronic
chr15:89186319(+) A-I      intronic
chr15:89183931(+) A-I      intronic
chr15:89187600(+) A-I      intronic
chr15:89184009(+) A-I      intronic
chr15:89185434(+) A-I      intronic
chr15:89186870(+) A-I      intronic
chr15:89185989(+) A-I      intronic
chr15:89197234(+) A-I      intronic
chr15:89186421(+) A-I      intronic
chr15:89184075(+) A-I      intronic
chr15:89185265(+) A-I      intronic
chr15:89185436(+) A-I      intronic
chr15:89185037(+) A-I      intronic
chr15:89186315(+) A-I      intronic
chr15:89197078(+) A-I      intronic
chr15:89187588(+) A-I      intronic
chr15:89183939(+) A-I      intronic
chr15:89187503(+) A-I      intronic
chr15:89186082(+) A-I      intronic
chr15:89185872(+) A-I      intronic
chr15:89185125(+) A-I      intronic
chr15:89187587(+) A-I      intronic
chr15:89187644(+) A-I      intronic
chr15:89184304(+) A-I      intronic
chr15:89187609(+) A-I      intronic
chr15:89186814(+) A-I      intronic
chr15:89187510(+) A-I      intronic
chr15:89185869(+) A-I      intronic
chr15:89186841(+) A-I      intronic
chr15:89184365(+) A-I      intronic
chr15:89185046(+) A-I      intronic
chr15:89186733(+) A-I      intronic
chr15:89185264(+) A-I      intronic
chr15:89186391(+) A-I      intronic
chr15:89185873(+) A-I      intronic
chr15:89186316(+) A-I      intronic
chr15:89185326(+) A-I      intronic
chr15:89187579(+) A-I      intronic
chr15:89185985(+) A-I      intronic
chr15:89186680(+) A-I      intronic
chr15:89184353(+) A-I      intronic
chr15:89184059(+) A-I      intronic
chr15:89186854(+) A-I      intronic
chr15:89185302(+) A-I      intronic
chr15:89184354(+) A-I      intronic
chr15:89190025(+) A-I      intronic
chr15:89185925(+) A-I      intronic
chr15:89186259(+) A-I      intronic
chr15:89185297(+) A-I      intronic
chr15:89186783(+) A-I      intronic
chr15:89187643(+) A-I      intronic
chr15:89185369(+) A-I      intronic
chr15:89185084(+) A-I      intronic
chr15:89183966(+) A-I      intronic
chr15:89186031(+) A-I      intronic
chr15:89184110(+) A-I      intronic
chr15:89187617(+) A-I      intronic
chr15:89185977(+) A-I      intronic
chr15:89187684(+) A-I      intronic
chr15:89186785(+) A-I      intronic
chr15:89185927(+) A-I      intronic
chr15:89184427(+) A-I      intronic
chr15:89186782(+) A-I      intronic
chr15:89186022(+) A-I      intronic
chr15:89183994(+) A-I      intronic
chr15:89186770(+) A-I      intronic
chr15:89184051(+) A-I      intronic
chr15:89186240(+) A-I      intronic
chr15:89186199(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ISG20
chr15:89183937(+) A-I intron -    22327324
chr15:89185925(+) A-I intron -    22327324
chr15:89185941(+) A-I intron -    22327324
chr15:89186056(+) A-I intron -    22327324
chr15:89183931(+) A-G intron -    22484847
chr15:89183937(+) A-G intron -    22484847
chr15:89183966(+) A-G intron -    22484847
chr15:89184009(+) A-G intron -    22484847
chr15:89184075(+) A-G intron -    22484847
chr15:89184110(+) A-G intron -    22484847
chr15:89184354(+) A-G intron -    22484847
chr15:89184365(+) A-G intron -    22484847
chr15:89185436(+) A-G intron -    22484847
chr15:89185925(+) A-G intron -    22484847
chr15:89185928(+) A-G intron -    22484847
chr15:89185941(+) A-G intron -    22484847
chr15:89185989(+) A-G intron -    22484847
chr15:89186056(+) A-G intron -    22484847
chr15:89186121(+) A-G intron -    22484847
chr15:89186199(+) A-G intron -    22484847
chr15:89186391(+) A-G intron -    22484847
chr15:89186421(+) A-G intron -    22484847
chr15:89187614(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ISG20
chr15:89182396-89182397(+) m6A exon//intron       24209618//24981863
chr15:89182595-89182596(+) m6A 5'UTR//exon       24209618//24981863
chr15:89182628-89182629(+) m6A CDS//exon       24209618//24981863
chr15:89182756-89182757(+) m6A CDS//exon       24209618
chr15:89195150-89195151(+) m6A exon//intron       -
chr15:89195413-89195414(+) m6A CDS//exon       -
chr15:89195479-89195480(+) m6A CDS//exon       -
chr15:89198757-89198758(+) m6A CDS//exon       24981863
chr15:89198788-89198789(+) m6A 3'UTR//exon       24981863
chr15:89198812-89198813(+) m6A 3'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ISG20
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: ISG20

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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