Detail Information

Basic Information:


  VIRBase ID:  

VHID00033240

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-4 PLK3
miRBase
Accession/Entrez ID		 zikv-mir-4 1263
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CNK//FNK//PLK-3//PRK

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PLK3
chr1:45267170(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PLK3
chr1:45270777(+) C-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PLK3
chr1:45266097-45266098(+) m6A 5'UTR//exon       24209618
chr1:45266111-45266112(+) m6A 5'UTR//exon       24209618
chr1:45266239-45266240(+) m6A CDS//exon       -
chr1:45266277-45266278(+) m6A CDS//exon       -
chr1:45266298-45266299(+) m6A CDS//exon       -
chr1:45266550-45266551(+) m6A CDS//exon       -
chr1:45266735-45266736(+) m6A CDS//exon       -
chr1:45268479-45268480(+) m6A CDS//exon       24284625
chr1:45268841-45268842(+) m6A exon//intron       24284625
chr1:45271291-45271292(+) m6A CDS//exon       24981863
chr1:45271333-45271334(+) m6A CDS//exon       24981863
chr1:45271351-45271352(+) m6A 3'UTR//exon       24981863
chr1:45271471-45271472(+) m6A 3'UTR//exon       24981863
chr1:45271574-45271575(+) m6A 3'UTR//exon       24981863
chr1:45271595-45271596(+) m6A 3'UTR//exon       24981863
chr1:45271648-45271649(+) m6A 3'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PLK3
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-4
Interactor2: PLK3

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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