Detail Information

Basic Information:


  VIRBase ID:  

VHID00032615

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 SEC14L1P1
miRBase
Accession/Entrez ID		 zikv-mir-3 729799
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SEC14L1P1
chr11:43920363(+) A-I      ncRNA
chr11:43918982(+) A-I      ncRNA
chr11:43920356(+) A-I      ncRNA
chr11:43919014(+) A-I      ncRNA
chr11:43920337(+) A-I      ncRNA
chr11:43920100(+) A-I      ncRNA
chr11:43920329(+) A-I      ncRNA
chr11:43918986(+) A-I      ncRNA
chr11:43920290(+) A-I      ncRNA
chr11:43920116(+) A-I      ncRNA
chr11:43920050(+) A-I      ncRNA
chr11:43919000(+) A-I      ncRNA
chr11:43919038(+) A-I      ncRNA
chr11:43919016(+) A-I      ncRNA
chr11:43920115(+) A-I      ncRNA
chr11:43918942(+) A-I      ncRNA

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SEC14L1P1
chr11:43919205-43919206(+) m6A exon       22608085
chr11:43919255-43919256(+) m6A exon       24981863
chr11:43919305-43919306(+) m6A exon       -
chr11:43919350-43919351(+) m6A exon       -
chr11:43919361-43919362(+) m6A exon       -
chr11:43919522-43919523(+) m6A exon       -
chr11:43920155-43920156(+) m6A exon       24209618
chr11:43920168-43920169(+) m6A exon       24209618
chr11:43920183-43920184(+) m6A exon       24209618
chr11:43920202-43920203(+) m6A exon       -
chr11:43920471-43920472(+) m6A exon       24209618
chr11:43920496-43920497(+) m6A exon       24209618
chr11:43920521-43920522(+) m6A exon       24209618
chr11:43920535-43920536(+) m6A exon       24209618
chr11:43920541-43920542(+) m6A exon       24209618
chr11:43920650-43920651(+) m6A exon       24284625//22608085
chr11:43920704-43920705(+) m6A exon       22608085
chr11:43920736-43920737(+) m6A exon       22608085
chr11:43920754-43920755(+) m6A exon       22608085
chr11:43921163-43921164(+) m6A exon       24209618

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SEC14L1P1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: SEC14L1P1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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