Detail Information

Basic Information:


  VIRBase ID:  

VHID00032597

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 RAET1K
miRBase
Accession/Entrez ID		 zikv-mir-3 646024
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - -

RNA Editing:


Resource Symbol Editing Position
Lncediting RAET1K
    chr6: 150319350
Resource Symbol Editing Position Change Genetic Region
RADAR RAET1K
chr6:150319350(-) A-I      ncRNA

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RAET1K
chr6:150322007-150322008(-) m6A exon       24284625//27773535
chr6:150322026-150322027(-) m6A exon       24284625//27773535
chr6:150322039-150322040(-) m6A exon       27773535
chr6:150322089-150322090(-) m6A exon       24981863//27773535//27371828//22608085
chr6:150322138-150322139(-) m6A exon       24284625//25456834//27773535//27371828//22608085
chr6:150322152-150322153(-) m6A exon       24284625//25456834//27773535//27371828//22608085
chr6:150322174-150322175(-) m6A exon       24284625
chr6:150322178-150322179(-) m6A exon       24284625//25456834//27773535//27371828//22608085
chr6:150322214-150322215(-) m6A exon       24284625//25456834//27773535//27371828//22608085
chr6:150322450-150322451(-) m6A exon//intron       24284625//27773535//22608085
chr6:150322464-150322465(-) m6A exon//intron       24284625//27773535//22608085
chr6:150322558-150322559(-) m6A exon       24284625//24209618//27773535//22608085
chr6:150322568-150322569(-) m6A exon       24284625//24209618//27773535//22608085
chr6:150322612-150322613(-) m6A exon       24284625//24209618//27773535//22608085
chr6:150322618-150322619(-) m6A exon       24284625//24209618
chr6:150322622-150322623(-) m6A exon       24284625//27773535//22608085
chr6:150322633-150322634(-) m6A exon       24284625//25456834//27773535//22608085
chr6:150322751-150322752(-) m6A exon       24284625//27773535
chr6:150322757-150322758(-) m6A exon       24284625//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RAET1K
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: RAET1K

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...