Detail Information

Basic Information:


  VIRBase ID:  

VHID00032345

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 NBPF10
miRBase
Accession/Entrez ID		 zikv-mir-3 100132406
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - AB6//AG1//NBPF9

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NBPF10
chr1:145369685(+) A-I      3'UTR
chr1:145369709(+) A-I      3'UTR
chr1:145369712(+) A-I      3'UTR
chr1:145369695(+) A-I      3'UTR
chr1:145369708(+) A-I      3'UTR
chr1:145369498(+) A-I      3'UTR
chr1:145369690(+) A-I      3'UTR
chr1:145369556(+) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NBPF10
chr1:145290907-145290908(+) m6A intron       24981863
chr1:145290946-145290947(+) m6A intron       24981863
chr1:145293451-145293452(+) m6A CDS//intron       -
chr1:145293471-145293472(+) m6A CDS//intron       -
chr1:145293500-145293501(+) m6A CDS//intron       -
chr1:145293514-145293515(+) m6A CDS//intron       -
chr1:145322861-145322862(+) m6A CDS//intron       -
chr1:145322912-145322913(+) m6A CDS//intron       24981863
chr1:145322941-145322942(+) m6A CDS//intron       24981863
chr1:145323683-145323684(+) m6A CDS//intron       24981863
chr1:145323689-145323690(+) m6A CDS//intron       24981863
chr1:145324394-145324395(+) m6A CDS//intron       24981863
chr1:145366967-145366968(+) m6A CDS//intron       24981863
chr1:145366996-145366997(+) m6A CDS//intron       24981863//27371828//22608085
chr1:145367753-145367754(+) m1A 3'UTR//CDS//intron       26863410
chr1:145367774-145367775(+) m1A CDS//intron       26863410
chr1:145367797-145367798(+) m1A CDS//intron       26863410
chr1:145367806-145367807(+) m6A CDS//intron       24284625//25456834//24981863//27371828//22608085
chr1:145368487-145368488(+) m6A CDS       24284625//25456834//24981863//22608085
chr1:145368530-145368531(+) m6A CDS       24284625//24981863//22608085
chr1:145368581-145368582(+) m6A CDS       24284625//24981863//22608085
chr1:145368610-145368611(+) m6A CDS       24284625//24981863//22608085
chr1:145368726-145368727(+) m6A 3'UTR       24284625//24981863//22608085
chr1:145368780-145368781(+) m6A 3'UTR       24284625//24981863//22575960//22608085
chr1:145368823-145368824(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085
chr1:145368857-145368858(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085
chr1:145368864-145368865(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr1:145368926-145368927(+) m6A 3'UTR       24284625//24981863//22608085
chr1:145368940-145368941(+) m6A 3'UTR       24284625//24981863//22608085
chr1:145369368-145369369(+) Y 3'UTR       26075521
chr1:145369753-145369754(+) Y 3'UTR       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NBPF10
Chromatin K562 cells     -
Exosome Blood     -
Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: NBPF10

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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