Detail Information

Basic Information:


  VIRBase ID:  

VHID00032180

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 SERINC4
miRBase
Accession/Entrez ID		 zikv-mir-3 619189
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SERINC4
chr15:44086541-44086542(-) m6A 3'UTR       27773535
chr15:44086686-44086687(-) m6A 3'UTR       27773535
chr15:44086691-44086692(-) m6A 3'UTR       27773535
chr15:44086772-44086773(-) m6A 3'UTR       27773535
chr15:44086780-44086781(-) m6A 3'UTR       27773535
chr15:44086851-44086852(-) m6A 3'UTR       24981863
chr15:44086858-44086859(-) m6A 3'UTR       24981863
chr15:44086868-44086869(-) m6A 3'UTR       24981863
chr15:44086924-44086925(-) m6A 3'UTR       24981863
chr15:44086944-44086945(-) m6A 3'UTR       24981863
chr15:44087108-44087109(-) m6A 3'UTR       -
chr15:44087183-44087184(-) m6A 3'UTR       -
chr15:44087269-44087270(-) m6A 3'UTR//CDS       -
chr15:44091238-44091239(-) m6A 3'UTR//CDS//exon       27773535
chr15:44092189-44092190(-) m6A 5'UTR       25456834
chr15:44092209-44092210(-) m6A 5'UTR       25456834
chr15:44092250-44092251(-) m6A 5'UTR       25456834
chr15:44092295-44092296(-) m6A 5'UTR       25456834
chr15:44092377-44092378(-) m6A 5'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SERINC4
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: SERINC4

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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