Detail Information

Basic Information:


  VIRBase ID:  

VHID00031854

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 PTPRQ
miRBase
Accession/Entrez ID		 zikv-mir-3 374462
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - DFNA73//DFNB84//DFNB84A//PTPGMC1//R-PTP-Q

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PTPRQ
chr12:80969409(+) A-I      intronic
chr12:80960380(+) A-I      intronic
chr12:80960388(+) A-I      intronic
chr12:80969443(+) A-I      intronic
chr12:80960393(+) A-I      intronic
chr12:80969497(+) A-I      intronic
chr12:80969442(+) A-I      intronic
chr12:80969498(+) A-I      intronic
chr12:80969404(+) A-I      intronic
chr12:80960177(+) A-I      intronic
chr12:80969503(+) A-I      intronic
chr12:80969433(+) A-I      intronic
chr12:80969489(+) A-I      intronic
chr12:80969280(+) A-I      intronic
chr12:80972311(+) A-I      intronic
chr12:80972299(+) A-I      intronic
chr12:80952953(+) A-I      intronic
chr12:80969088(+) A-I      intronic
chr12:80952963(+) A-I      intronic
chr12:80969366(+) A-I      intronic
chr12:80969423(+) A-I      intronic
chr12:80960398(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PTPRQ
chr12:81028658-81028659(+) m6A exon//intron       -
chr12:81028663-81028664(+) m6A exon//intron       -
chr12:81028689-81028690(+) m6A exon//intron       -
chr12:81028702-81028703(+) m6A exon//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PTPRQ
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: PTPRQ

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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