Detail Information

Basic Information:


  VIRBase ID:  

VHID00030981

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 ZNF567
miRBase
Accession/Entrez ID		 zikv-mir-3 163081
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF567
chr19:37182186(+) A-I      intronic
chr19:37182160(+) A-I      intronic
chr19:37203049(+) A-I      intronic
chr19:37209326(+) A-I      intronic
chr19:37209333(+) A-I      intronic
chr19:37204765(+) A-I      intronic
chr19:37204758(+) A-I      intronic
chr19:37204757(+) A-I      intronic
chr19:37209286(+) A-I      intronic
chr19:37181293(+) A-I      intronic
chr19:37204656(+) A-I      intronic
chr19:37183342(+) A-I      intronic
chr19:37183414(+) A-I      intronic
chr19:37182190(+) A-I      intronic
chr19:37183439(+) A-I      intronic
chr19:37183330(+) A-I      intronic
chr19:37184000(+) A-I      intronic
chr19:37182083(+) A-I      intronic
chr19:37203971(+) A-I      intronic
chr19:37181294(+) A-I      intronic
chr19:37209384(+) A-I      intronic
chr19:37205163(+) A-I      intronic
chr19:37207832(+) A-I      intronic
chr19:37207991(+) A-I      intronic
chr19:37209280(+) A-I      intronic
chr19:37209281(+) A-I      intronic
chr19:37183344(+) A-I      intronic
chr19:37184059(+) A-I      intronic
chr19:37207808(+) A-I      intronic
chr19:37205157(+) A-I      intronic
chr19:37205095(+) A-I      intronic
chr19:37183952(+) A-I      intronic
chr19:37181381(+) A-I      intronic
chr19:37186284(+) A-I      intronic
chr19:37206126(+) A-I      intronic
chr19:37207990(+) A-I      intronic
chr19:37183540(+) A-I      intronic
chr19:37204756(+) A-I      intronic
chr19:37203185(+) A-I      intronic
chr19:37202074(+) A-I      intronic
chr19:37183420(+) A-I      intronic
chr19:37204066(+) A-I      intronic
chr19:37207746(+) A-I      intronic
chr19:37207911(+) A-I      intronic
chr19:37185045(+) A-I      intronic
chr19:37181313(+) A-I      intronic
chr19:37184336(+) A-I      intronic
chr19:37206102(+) A-I      intronic
chr19:37204461(+) A-I      intronic
chr19:37182296(+) A-I      intronic
chr19:37205266(+) A-I      intronic
chr19:37205189(+) A-I      intronic
chr19:37207797(+) A-I      intronic
chr19:37207867(+) A-I      intronic
chr19:37204147(+) A-I      intronic
chr19:37182084(+) A-I      intronic
chr19:37203953(+) A-I      intronic
chr19:37183498(+) A-I      intronic
chr19:37183404(+) A-I      intronic
chr19:37183325(+) A-I      intronic
chr19:37181309(+) A-I      intronic
chr19:37209205(+) A-I      intronic
chr19:37182689(+) A-I      intronic
chr19:37209130(+) A-I      intronic
chr19:37181233(+) A-I      intronic
chr19:37183328(+) A-I      intronic
chr19:37181240(+) A-I      intronic
chr19:37207914(+) A-I      intronic
chr19:37182692(+) A-I      intronic
chr19:37204028(+) A-I      intronic
chr19:37183506(+) A-I      intronic
chr19:37186448(+) A-I      intronic
chr19:37182694(+) A-I      intronic
chr19:37202073(+) A-I      intronic
chr19:37204451(+) A-I      intronic
chr19:37204158(+) A-I      intronic
chr19:37202153(+) A-I      intronic
chr19:37203048(+) A-I      intronic
chr19:37204432(+) A-I      intronic
chr19:37209140(+) A-I      intronic
chr19:37202178(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF567
chr19:37181233(+) A-G intron -    22484847
chr19:37182692(+) A-G intron -    22484847
chr19:37182694(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF567
chr19:37180345-37180346(+) m6A 5'UTR//exon       25456834//24981863
chr19:37180358-37180359(+) m6A 5'UTR//exon       25456834//24981863
chr19:37185705-37185706(+) m6A 5'UTR//exon//intron       -
chr19:37203741-37203742(+) m6A CDS       22608085
chr19:37209855-37209856(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37209870-37209871(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37209892-37209893(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37209940-37209941(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37209974-37209975(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37209993-37209994(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210099-37210100(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr19:37210144-37210145(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr19:37210151-37210152(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr19:37210238-37210239(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210315-37210316(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210332-37210333(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210381-37210382(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210462-37210463(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210529-37210530(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210546-37210547(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210589-37210590(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210613-37210614(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210697-37210698(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210714-37210715(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210757-37210758(+) m6A CDS//intron       24981863//22608085
chr19:37210798-37210799(+) m6A CDS//intron       24981863//22608085
chr19:37210865-37210866(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210925-37210926(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37210949-37210950(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr19:37210966-37210967(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr19:37211009-37211010(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37211033-37211034(+) m6A CDS//intron       24209618//24981863//27773535//22608085
chr19:37211117-37211118(+) m6A CDS//intron       24209618//24981863//27773535//22608085
chr19:37211134-37211135(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37211177-37211178(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37211218-37211219(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr19:37211369-37211370(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr19:37211386-37211387(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr19:37211429-37211430(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr19:37211453-37211454(+) m6A CDS//intron       24209618//24981863//27773535//22608085
chr19:37211470-37211471(+) m6A CDS//intron       24209618//24981863//27773535//22608085
chr19:37211517-37211518(+) m6A CDS//intron       24981863//27773535//22608085
chr19:37211537-37211538(+) m6A CDS//intron       24981863//22608085
chr19:37211553-37211554(+) m6A CDS//intron       24981863//22608085
chr19:37211612-37211613(+) m6A 3'UTR//intron       24981863
chr19:37211644-37211645(+) m6A 3'UTR//intron       24981863
chr19:37211753-37211754(+) m6A 3'UTR//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF567
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: ZNF567

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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