Detail Information

Basic Information:


  VIRBase ID:  

VHID00030525

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 UBLCP1
miRBase
Accession/Entrez ID		 zikv-mir-3 134510
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CPUB1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR UBLCP1
chr5:158703246(+) A-I      intronic
chr5:158702485(+) A-I      intronic
chr5:158703175(+) A-I      intronic
chr5:158702627(+) A-I      intronic
chr5:158703176(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED UBLCP1
chr5:158703176(+) A-G intron -    22484847
chr5:158705738(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UBLCP1
chr5:158690253-158690254(+) m6A 5'UTR       24981863
chr5:158710259-158710260(+) m6A CDS//exon       24981863
chr5:158710266-158710267(+) m6A CDS//exon       24981863
chr5:158711932-158711933(+) m6A CDS//exon       26404942//22608085
chr5:158711984-158711985(+) m6A 3'UTR//exon       24981863//26404942//22608085
chr5:158712025-158712026(+) m6A 3'UTR//exon       24981863//26404942//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate UBLCP1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: UBLCP1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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