Detail Information

Basic Information:


  VIRBase ID:  

VHID00028597

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 SRR
miRBase
Accession/Entrez ID		 zikv-mir-3 63826
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - ILV1//ISO1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SRR
chr17:2216909(+) A-I      intronic
chr17:2216844(+) A-I      intronic
chr17:2216918(+) A-I      intronic
chr17:2216910(+) A-I      intronic
chr17:2216853(+) A-I      intronic
chr17:2216854(+) A-I      intronic
chr17:2209570(+) A-I      intronic
chr17:2209891(+) A-I      intronic
chr17:2209756(+) A-I      intronic
chr17:2209791(+) A-I      intronic
chr17:2209827(+) A-I      intronic
chr17:2209917(+) A-I      intronic
chr17:2209926(+) A-I      intronic
chr17:2214247(+) A-I      intronic
chr17:2214696(+) A-I      intronic
chr17:2214239(+) A-I      intronic
chr17:2214292(+) A-I      intronic
chr17:2209971(+) A-I      intronic
chr17:2209860(+) A-I      intronic
chr17:2209133(+) A-I      intronic
chr17:2209531(+) A-I      intronic
chr17:2209516(+) A-I      intronic
chr17:2209459(+) A-I      intronic
chr17:2209190(+) A-I      intronic
chr17:2209173(+) A-I      intronic
chr17:2209167(+) A-I      intronic
chr17:2209153(+) A-I      intronic
chr17:2209141(+) A-I      intronic
chr17:2209095(+) A-I      intronic
chr17:2209864(+) A-I      intronic
chr17:2209825(+) A-I      intronic
chr17:2209447(+) A-I      intronic
chr17:2213675(+) A-I      intronic
chr17:2209055(+) A-I      intronic
chr17:2214372(+) A-I      intronic
chr17:2214828(+) A-I      intronic
chr17:2216276(+) A-I      intronic
chr17:2209362(+) A-I      intronic
chr17:2220577(+) A-I      intronic
chr17:2214064(+) A-I      intronic
chr17:2207712(+) A-I      intronic
chr17:2207702(+) A-I      intronic
chr17:2209068(+) A-I      intronic
chr17:2209733(+) A-I      intronic
chr17:2207583(+) A-I      intronic
chr17:2209483(+) A-I      intronic
chr17:2214380(+) A-I      intronic
chr17:2209158(+) A-I      intronic
chr17:2207970(+) A-I      intronic
chr17:2217730(+) A-I      intronic
chr17:2212531(+) A-I      intronic
chr17:2209426(+) A-I      intronic
chr17:2215289(+) A-I      intronic
chr17:2209357(+) A-I      intronic
chr17:2209397(+) A-I      intronic
chr17:2215839(+) A-I      intronic
chr17:2209966(+) A-I      intronic
chr17:2216510(+) A-I      intronic
chr17:2209092(+) A-I      intronic
chr17:2207929(+) A-I      intronic
chr17:2213730(+) A-I      intronic
chr17:2209109(+) A-I      intronic
chr17:2216604(+) A-I      intronic
chr17:2213973(+) A-I      intronic
chr17:2216468(+) A-I      intronic
chr17:2213781(+) A-I      intronic
chr17:2209936(+) A-I      intronic
chr17:2216509(+) A-I      intronic
chr17:2216883(+) A-I      intronic
chr17:2214445(+) A-I      intronic
chr17:2207601(+) A-I      intronic
chr17:2211942(+) A-I      intronic
chr17:2214728(+) A-I      intronic
chr17:2215420(+) A-I      intronic
chr17:2209024(+) A-I      intronic
chr17:2220718(+) A-I      intronic
chr17:2209096(+) A-I      intronic
chr17:2209456(+) A-I      intronic
chr17:2213953(+) A-I      intronic
chr17:2218415(+) A-I      intronic
chr17:2215271(+) A-I      intronic
chr17:2218283(+) A-I      intronic
chr17:2209963(+) A-I      intronic
chr17:2209058(+) A-I      intronic
chr17:2214457(+) A-I      intronic
chr17:2207780(+) A-I      intronic
chr17:2216350(+) A-I      intronic
chr17:2209037(+) A-I      intronic
chr17:2213896(+) A-I      intronic
chr17:2214012(+) A-I      intronic
chr17:2214715(+) A-I      intronic
chr17:2209131(+) A-I      intronic
chr17:2214751(+) A-I      intronic
chr17:2209463(+) A-I      intronic
chr17:2209890(+) A-I      intronic
chr17:2209777(+) A-I      intronic
chr17:2209943(+) A-I      intronic
chr17:2209560(+) A-I      intronic
chr17:2213699(+) A-I      intronic
chr17:2209157(+) A-I      intronic
chr17:2215768(+) A-I      intronic
chr17:2216346(+) A-I      intronic
chr17:2209455(+) A-I      intronic
chr17:2207999(+) A-I      intronic
chr17:2209846(+) A-I      intronic
chr17:2207711(+) A-I      intronic
chr17:2213898(+) A-I      intronic
chr17:2214855(+) A-I      intronic
chr17:2209452(+) A-I      intronic
chr17:2214752(+) A-I      intronic
chr17:2209460(+) A-I      intronic
chr17:2214418(+) A-I      intronic
chr17:2215436(+) A-I      intronic
chr17:2215249(+) A-I      intronic
chr17:2218442(+) A-I      intronic
chr17:2209018(+) A-I      intronic
chr17:2216879(+) A-I      intronic
chr17:2209387(+) A-I      intronic
chr17:2209091(+) A-I      intronic
chr17:2207977(+) A-I      intronic
chr17:2220946(+) A-I      intronic
chr17:2209835(+) A-I      intronic
chr17:2213693(+) A-I      intronic
chr17:2220559(+) A-I      intronic
chr17:2215475(+) A-I      intronic
chr17:2209786(+) A-I      intronic
chr17:2216548(+) A-I      intronic
chr17:2216338(+) A-I      intronic
chr17:2212446(+) A-I      intronic
chr17:2209489(+) A-I      intronic
chr17:2211994(+) A-I      intronic
chr17:2209074(+) A-I      intronic
chr17:2214002(+) A-I      intronic
chr17:2209900(+) A-I      intronic
chr17:2219916(+) A-I      intronic
chr17:2213719(+) A-I      intronic
chr17:2207951(+) A-I      intronic
chr17:2215877(+) A-I      intronic
chr17:2207994(+) A-I      intronic
chr17:2216469(+) A-I      intronic
chr17:2214867(+) A-I      intronic
chr17:2209121(+) A-I      intronic
chr17:2209044(+) A-I      intronic
chr17:2214443(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SRR
chr17:2207986(+) C-T intron -    22484847
chr17:2209096(+) A-G intron -    22484847
chr17:2214855(+) A-G intron -    22484847
chr17:2216359(+) T-C intron -    22484847
chr17:2220074(+) T-C intron -    22484847
chr17:2220085(+) T-C intron -    22484847
chr17:2220946(+) A-G intron -    22484847
chr17:2220964(+) T-C intron -    22484847
chr17:2221599(+) T-C intron -    22484847
chr17:2221788(+) T-C intron -    22484847
chr17:2221855(+) T-C intron -    22484847
chr17:2221886(+) T-C intron -    22484847
chr17:2223571(+) A-T intron -    22484847
chr17:2223572(+) G-T intron -    22484847
chr17:2225971(+) G-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SRR
chr17:2207071-2207072(+) m6A 5'UTR//intron       24981863
chr17:2210125-2210126(+) m6A intron       24284625//25456834//24981863//22608085
chr17:2210167-2210168(+) m6A intron       24284625//24209618//25456834//24981863//22608085
chr17:2210177-2210178(+) m6A intron       24284625//24209618//25456834//24981863//22608085
chr17:2210201-2210202(+) m6A intron       24284625//24209618//25456834//24981863//22608085
chr17:2210307-2210308(+) m6A intron       24284625//25456834//22608085
chr17:2210343-2210344(+) m6A 5'UTR//intron       24284625//24209618//24981863//22608085
chr17:2210396-2210397(+) m6A 5'UTR//intron       24284625//24209618//24981863//22608085
chr17:2210430-2210431(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//22608085
chr17:2210443-2210444(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//22608085
chr17:2210536-2210537(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//22608085
chr17:2210654-2210655(+) m6A intron       24284625//24209618//25456834//24981863//22575960//22608085
chr17:2210870-2210871(+) m6A intron       24284625//24209618//22608085
chr17:2210887-2210888(+) m6A intron       24284625//24209618//22608085
chr17:2210942-2210943(+) m6A intron       24284625//24209618//22608085
chr17:2210950-2210951(+) m6A intron       24284625//24209618//22608085
chr17:2213143-2213144(+) m6A 5'UTR//intron       22608085
chr17:2222148-2222149(+) m6A 5'UTR//CDS//intron       27773535
chr17:2222158-2222159(+) m6A 5'UTR//CDS//intron       27773535
chr17:2222168-2222169(+) m6A 5'UTR//CDS//intron       27773535
chr17:2227469-2227470(+) m6A 3'UTR       24981863//26404942
chr17:2227586-2227587(+) m6A 3'UTR       24981863//26404942//27371828
chr17:2227676-2227677(+) m6A 3'UTR       24981863//27371828
chr17:2227684-2227685(+) m6A 3'UTR       24981863//27371828
chr17:2228379-2228380(+) Y 3'UTR       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SRR
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: SRR

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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