Detail Information

Basic Information:


  VIRBase ID:  

VHID00028540

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 JAM2
miRBase
Accession/Entrez ID		 zikv-mir-3 58494
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - C21orf43//CD322//IBGC8//JAM-B//JAMB//PRO245//VE-JAM//VEJAM

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR JAM2
chr21:27080832(+) A-I      intronic
chr21:27080837(+) A-I      intronic
chr21:27088435(+) A-I      3'UTR
chr21:27080840(+) A-I      intronic
chr21:27080805(+) A-I      intronic
chr21:27088436(+) A-I      3'UTR
chr21:27088439(+) A-I      3'UTR
chr21:27088459(+) A-I      3'UTR
chr21:27080269(+) A-I      intronic
chr21:27088476(+) A-I      3'UTR
chr21:27088489(+) A-I      3'UTR
chr21:27088373(+) A-I      3'UTR
chr21:27050388(+) A-I      intronic
chr21:27088497(+) A-I      3'UTR
chr21:27088352(+) A-I      3'UTR
chr21:27088360(+) A-I      3'UTR
chr21:27017237(+) A-I      intronic
chr21:27034589(+) A-I      intronic
chr21:27038241(+) A-I      intronic
chr21:27041465(+) A-I      intronic
chr21:27078674(+) A-I      intronic
chr21:27041489(+) A-I      intronic
chr21:27041529(+) A-I      intronic
chr21:27048385(+) A-I      intronic
chr21:27048414(+) A-I      intronic
chr21:27048565(+) A-I      intronic
chr21:27050361(+) A-I      intronic
chr21:27078677(+) A-I      intronic
chr21:27079651(+) A-I      intronic
chr21:27080773(+) A-I      intronic
chr21:27050382(+) A-I      intronic
chr21:27051167(+) A-I      intronic
chr21:27051237(+) A-I      intronic
chr21:27057726(+) A-I      intronic
chr21:27057735(+) A-I      intronic
chr21:27072790(+) A-I      intronic
chr21:27086616(+) A-I      NonSyn:Stp->Trp
chr21:27069958(+) A-I      intronic
chr21:27051212(+) A-I      intronic
chr21:27069956(+) A-I      intronic
chr21:27080867(+) A-I      intronic
chr21:27080782(+) A-I      intronic
chr21:27080256(+) A-I      intronic
chr21:27072934(+) A-I      intronic
chr21:27080283(+) A-I      intronic
chr21:27079697(+) A-I      intronic
chr21:27038174(+) A-I      intronic
chr21:27078574(+) A-I      intronic
chr21:27078594(+) A-I      intronic
chr21:27079311(+) A-I      intronic
chr21:27080398(+) A-I      intronic
chr21:27080274(+) A-I      intronic
chr21:27072873(+) A-I      intronic
chr21:27078514(+) A-I      intronic
chr21:27033678(+) A-I      intronic
chr21:27072709(+) A-I      intronic
chr21:27032330(+) A-I      intronic
chr21:27086665(+) A-I      3'UTR
chr21:27086660(+) A-I      3'UTR
chr21:27086725(+) A-I      3'UTR
chr21:27086695(+) A-I      3'UTR
chr21:27086655(+) A-I      3'UTR
chr21:27088363(+) A-I      3'UTR
chr21:27086789(+) A-I      3'UTR
chr21:27069982(+) A-I      intronic
chr21:27057120(+) A-I      intronic
chr21:27080868(+) A-I      intronic
chr21:27080652(+) A-I      intronic
chr21:27080786(+) A-I      intronic
chr21:27079647(+) A-I      intronic
chr21:27079781(+) A-I      intronic
chr21:27079714(+) A-I      intronic
chr21:27041498(+) A-I      intronic
chr21:27080783(+) A-I      intronic
chr21:27041499(+) A-I      intronic
chr21:27080682(+) A-I      intronic
chr21:27057074(+) A-I      intronic
chr21:27033555(+) A-I      intronic
chr21:27041542(+) A-I      intronic
chr21:27057778(+) A-I      intronic
chr21:27079634(+) A-I      intronic
chr21:27079312(+) A-I      intronic
chr21:27079703(+) A-I      intronic
chr21:27079700(+) A-I      intronic
chr21:27020412(+) A-I      intronic
chr21:27078556(+) A-I      intronic
chr21:27078587(+) A-I      intronic
chr21:27080781(+) A-I      intronic
chr21:27072802(+) A-I      intronic
chr21:27032371(+) A-I      intronic
chr21:27064220(+) A-I      intronic
chr21:27069245(+) A-I      intronic
chr21:27079673(+) A-I      intronic
chr21:27079709(+) A-I      intronic
chr21:27033500(+) A-I      intronic
chr21:27056997(+) A-I      intronic
chr21:27069449(+) A-I      intronic
chr21:27080422(+) A-I      intronic
chr21:27080377(+) A-I      intronic
chr21:27080808(+) A-I      intronic
chr21:27041508(+) A-I      intronic
chr21:27051181(+) A-I      intronic
chr21:27039078(+) A-I      intronic
chr21:27048544(+) A-I      intronic
chr21:27080434(+) A-I      intronic
chr21:27069307(+) A-I      intronic
chr21:27079083(+) A-I      intronic
chr21:27041429(+) A-I      intronic
chr21:27033652(+) A-I      intronic
chr21:27033654(+) A-I      intronic
chr21:27086607(+) A-I      NonSyn:Gln->Arg

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase JAM2
chr21:27011616-27011617(+) m6A 5'UTR       -
chr21:27011658-27011659(+) m6A 5'UTR       -
chr21:27011842-27011843(+) m6A 5'UTR       -
chr21:27011902-27011903(+) m6A 5'UTR       25456834
chr21:27011907-27011908(+) m6A 5'UTR       25456834
chr21:27011933-27011934(+) m6A 5'UTR       25456834
chr21:27011980-27011981(+) m6A 5'UTR       25456834
chr21:27012091-27012092(+) m6A 5'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate JAM2
Exosome Blood     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: JAM2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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