Detail Information

Basic Information:


  VIRBase ID:  

VHID00025979

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 COPS8
miRBase
Accession/Entrez ID		 zikv-mir-3 10920
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - COP9//CSN8//SGN8

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase COPS8
chr2:237994478-237994479(+) m6A 5'UTR       -
chr2:237994554-237994555(+) m6A 5'UTR//exon       24981863
chr2:237994671-237994672(+) m6A 5'UTR//CDS//exon       24981863
chr2:238006770-238006771(+) m6A 3'UTR//exon//intron       -
chr2:238006840-238006841(+) m6A 3'UTR//intron       -
chr2:238006895-238006896(+) m6A 3'UTR//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate COPS8
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: COPS8

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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