Detail Information

Basic Information:


  VIRBase ID:  

VHID00025276

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 BAG2
miRBase
Accession/Entrez ID		 zikv-mir-3 9532
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - BAG-2//dJ417I1.2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BAG2
chr6:57046418(+) A-I      intronic
chr6:57046375(+) A-I      intronic
chr6:57046476(+) A-I      intronic
chr6:57046410(+) A-I      intronic
chr6:57046378(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BAG2
chr6:57037185-57037186(+) m6A 5'UTR       24284625//24981863//22575960
chr6:57037245-57037246(+) m6A 5'UTR       24284625//24981863//22575960
chr6:57046918-57046919(+) m6A CDS       24209618//24981863//27773535//22608085
chr6:57048605-57048606(+) m6A CDS       24209618//24981863//26404942//27773535//22608085
chr6:57048622-57048623(+) m6A CDS       24209618//24981863//26404942//27773535//22608085
chr6:57048649-57048650(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr6:57048659-57048660(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr6:57048845-57048846(+) Am CDS       -
chr6:57048877-57048878(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr6:57048899-57048900(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr6:57048952-57048953(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr6:57048995-57048996(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr6:57049156-57049157(+) m6A 3'UTR       -
chr6:57049212-57049213(+) Y 3'UTR       25219674
chr6:57049269-57049270(+) m6A 3'UTR       -
chr6:57049446-57049447(+) m6A 3'UTR       27773535
chr6:57049563-57049564(+) m6A 3'UTR       27773535
chr6:57049584-57049585(+) m6A 3'UTR       27773535
chr6:57049608-57049609(+) m6A 3'UTR       27773535
chr6:57049910-57049911(+) Y 3'UTR       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BAG2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: BAG2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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