Detail Information

Basic Information:


  VIRBase ID:  

VHID00024618

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 ZNF142
miRBase
Accession/Entrez ID		 zikv-mir-3 7701
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - HA4654//NEDISHM//pHZ-49

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF142
chr2:219518056(-) A-I      intronic
chr2:219519211(-) A-I      intronic
chr2:219517760(-) A-I      intronic
chr2:219518058(-) A-I      intronic
chr2:219518746(-) A-I      intronic
chr2:219518042(-) A-I      intronic
chr2:219519726(-) A-I      intronic
chr2:219518739(-) A-I      intronic
chr2:219517957(-) A-I      intronic
chr2:219519616(-) A-I      intronic
chr2:219518057(-) A-I      intronic
chr2:219519214(-) A-I      intronic
chr2:219519222(-) A-I      intronic
chr2:219519302(-) A-I      intronic
chr2:219519551(-) A-I      intronic
chr2:219519635(-) A-I      intronic
chr2:219519730(-) A-I      intronic
chr2:219519806(-) A-I      intronic
chr2:219522237(-) A-I      intronic
chr2:219522276(-) A-I      intronic
chr2:219522289(-) A-I      intronic
chr2:219522290(-) A-I      intronic
chr2:219522350(-) A-I      intronic
chr2:219511472(-) A-I      intronic
chr2:219522354(-) A-I      intronic
chr2:219518625(-) A-I      intronic
chr2:219511424(-) A-I      intronic
chr2:219511483(-) A-I      intronic
chr2:219517769(-) A-I      intronic
chr2:219517855(-) A-I      intronic
chr2:219517881(-) A-I      intronic
chr2:219517891(-) A-I      intronic
chr2:219517903(-) A-I      intronic
chr2:219518276(-) A-I      intronic
chr2:219518297(-) A-I      intronic
chr2:219518704(-) A-I      intronic
chr2:219518736(-) A-I      intronic
chr2:219518741(-) A-I      intronic
chr2:219518748(-) A-I      intronic
chr2:219519158(-) A-I      intronic
chr2:219519179(-) A-I      intronic
chr2:219511576(-) A-I      intronic
chr2:219504330(-) A-I      intronic
chr2:219503832(-) A-I      intronic
chr2:219519181(-) A-I      intronic
chr2:219519201(-) A-I      intronic
chr2:219519334(-) A-I      intronic
chr2:219520320(-) A-I      intronic
chr2:219518235(-) A-I      intronic
chr2:219519290(-) A-I      intronic
chr2:219519781(-) A-I      intronic
chr2:219517956(-) A-I      intronic
chr2:219519227(-) A-I      intronic
chr2:219518771(-) A-I      intronic
chr2:219521711(-) A-I      intronic
chr2:219518668(-) A-I      intronic
chr2:219519729(-) A-I      intronic
chr2:219519563(-) A-I      intronic
chr2:219511569(-) A-I      intronic
chr2:219518678(-) A-I      intronic
chr2:219520324(-) A-I      intronic
chr2:219518754(-) A-I      intronic
chr2:219519590(-) A-I      intronic
chr2:219517753(-) A-I      intronic
chr2:219519162(-) A-I      intronic
chr2:219519663(-) A-I      intronic
chr2:219518700(-) A-I      intronic
chr2:219519379(-) A-I      intronic
chr2:219518751(-) A-I      intronic
chr2:219517752(-) A-I      intronic
chr2:219520351(-) A-I      intronic
chr2:219518285(-) A-I      intronic
chr2:219518740(-) A-I      intronic
chr2:219518691(-) A-I      intronic
chr2:219519700(-) A-I      intronic
chr2:219522399(-) A-I      intronic
chr2:219518055(-) A-I      intronic
chr2:219503815(-) A-I      intronic
chr2:219503823(-) A-I      intronic
chr2:219520273(-) A-I      intronic
chr2:219518217(-) A-I      intronic
chr2:219503855(-) A-I      intronic
chr2:219518673(-) A-I      intronic
chr2:219517854(-) A-I      intronic
chr2:219519355(-) A-I      intronic
chr2:219504403(-) A-I      intronic
chr2:219519638(-) A-I      intronic
chr2:219517994(-) A-I      intronic
chr2:219503771(-) A-I      intronic
chr2:219518224(-) A-I      intronic
chr2:219520213(-) A-I      intronic
chr2:219520275(-) A-I      intronic
chr2:219519704(-) A-I      intronic
chr2:219521768(-) A-I      intronic
chr2:219519258(-) A-I      intronic
chr2:219519725(-) A-I      intronic
chr2:219518265(-) A-I      intronic
chr2:219521773(-) A-I      intronic
chr2:219519360(-) A-I      intronic
chr2:219518293(-) A-I      intronic
chr2:219517814(-) A-I      intronic
chr2:219519186(-) A-I      intronic
chr2:219518760(-) A-I      intronic
chr2:219503898(-) A-I      intronic
chr2:219519743(-) A-I      intronic
chr2:219519142(-) A-I      intronic
chr2:219515723(-) A-I      intronic
chr2:219518259(-) A-I      intronic
chr2:219519218(-) A-I      intronic
chr2:219518714(-) A-I      intronic
chr2:219518188(-) A-I      intronic
chr2:219518044(-) A-I      intronic
chr2:219511359(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF142
chr2:219518537(-) A-I intron -    22327324
chr2:219518673(-) A-I intron -    22327324
chr2:219518714(-) A-I intron -    22327324
chr2:219520320(-) A-I intron -    21960545
chr2:219518771(-) A-I intron -    21960545
chr2:219517752(-) A-G intron -    22484847
chr2:219517814(-) A-G intron -    22484847
chr2:219518224(-) A-G intron -    22484847
chr2:219518668(-) A-G intron -    22484847
chr2:219518673(-) A-G intron -    22484847
chr2:219518678(-) A-G intron -    22484847
chr2:219518714(-) A-G intron -    22484847
chr2:219518751(-) A-G intron -    22484847
chr2:219518754(-) A-G intron -    22484847
chr2:219518760(-) A-G intron -    22484847
chr2:219518771(-) A-G intron -    22484847
chr2:219519124(-) A-G intron -    22484847
chr2:219519186(-) A-G intron -    22484847
chr2:219519201(-) A-G intron -    22484847
chr2:219519363(-) A-G intron -    22484847
chr2:219519611(-) A-G intron -    22484847
chr2:219519729(-) A-G intron -    22484847
chr2:219520320(-) A-G intron -    22484847
chr2:219520328(-) A-G intron -    22484847
chr2:219520351(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF142
chr2:219502644-219502645(-) m6A 3'UTR       27773535
chr2:219502700-219502701(-) m6A 3'UTR       27773535
chr2:219502873-219502874(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr2:219502879-219502880(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr2:219502924-219502925(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr2:219502935-219502936(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr2:219502965-219502966(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr2:219503003-219503004(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr2:219503009-219503010(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr2:219503073-219503074(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219503155-219503156(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219503173-219503174(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219503352-219503353(-) m6A 3'UTR//CDS       24284625
chr2:219503456-219503457(-) m6A 3'UTR//CDS       27773535
chr2:219506850-219506851(-) m6A 3'UTR//CDS       24284625//27773535
chr2:219507022-219507023(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219507035-219507036(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219507191-219507192(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:219507203-219507204(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:219507271-219507272(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:219507343-219507344(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219507478-219507479(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr2:219507512-219507513(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr2:219507695-219507696(-) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085
chr2:219507714-219507715(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27371828//22575960//22608085
chr2:219507877-219507878(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//22575960
chr2:219508014-219508015(-) m6A 3'UTR//CDS       24284625//22575960
chr2:219508048-219508049(-) m6A 3'UTR//CDS       24284625//22575960
chr2:219508057-219508058(-) m6A 3'UTR//CDS       24284625//22575960
chr2:219508212-219508213(-) m6A 3'UTR//CDS       24284625//27773535
chr2:219508272-219508273(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828
chr2:219508332-219508333(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828
chr2:219508384-219508385(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27371828
chr2:219508479-219508480(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27371828//22575960
chr2:219508535-219508536(-) m6A 3'UTR//CDS       24284625//27371828//22575960
chr2:219508551-219508552(-) m6A 3'UTR//CDS       24284625//27773535//27371828//22575960
chr2:219508669-219508670(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219508799-219508800(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219508806-219508807(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219508811-219508812(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219508867-219508868(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219508885-219508886(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219508894-219508895(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219508999-219509000(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219509030-219509031(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509039-219509040(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509057-219509058(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509086-219509087(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509237-219509238(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509280-219509281(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509292-219509293(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509302-219509303(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509309-219509310(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509346-219509347(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:219509433-219509434(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr2:219509547-219509548(-) m6A 3'UTR//CDS       24284625//24981863//27773535
chr2:219513550-219513551(-) m6A 3'UTR//CDS       24284625//27773535
chr2:219513702-219513703(-) m6A 3'UTR//CDS       24284625//24981863//27773535
chr2:219513878-219513879(-) m6A 3'UTR//CDS       24284625
chr2:219514008-219514009(-) m6A 3'UTR//CDS       24284625//27773535//22575960
chr2:219514067-219514068(-) m6A 3'UTR//CDS       24284625//27773535//22575960
chr2:219514104-219514105(-) m6A 3'UTR//CDS       24284625//22575960
chr2:219514146-219514147(-) m6A 3'UTR//CDS       24284625//22575960
chr2:219515128-219515129(-) m6A 3'UTR//CDS       24284625//22575960
chr2:219515180-219515181(-) m6A 3'UTR//CDS       24284625//27773535
chr2:219515220-219515221(-) m6A 3'UTR//CDS       24284625//27773535//27371828
chr2:219515241-219515242(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828
chr2:219516466-219516467(-) m6A 3'UTR//CDS//intron       24981863//27773535
chr2:219516477-219516478(-) m6A 3'UTR//CDS//intron       24981863//27773535
chr2:219516689-219516690(-) Am CDS//intron       -
chr2:219516793-219516794(-) m6A CDS//intron       24284625
chr2:219520905-219520906(-) m6A CDS       -
chr2:219520917-219520918(-) m6A CDS       24284625//27773535//27371828
chr2:219520937-219520938(-) m6A CDS       24284625//27773535//27371828
chr2:219520945-219520946(-) m6A CDS       24284625//27773535//27371828
chr2:219521009-219521010(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219521095-219521096(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219521132-219521133(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219521144-219521145(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219521169-219521170(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:219523438-219523439(-) m6A 5'UTR//intron       24284625//24981863//27773535//22575960
chr2:219523709-219523710(-) m6A 5'UTR//intron       24284625//27773535
chr2:219523783-219523784(-) m6A 5'UTR//intron       24284625
chr2:219523837-219523838(-) m6A 5'UTR//intron       24284625
chr2:219523881-219523882(-) m6A 5'UTR//intron       24284625//24981863//27371828//27773536
chr2:219523910-219523911(-) m6A 5'UTR//intron       24284625//27773536
chr2:219523985-219523986(-) m6A 5'UTR//intron       24284625//24981863//27773536
chr2:219524066-219524067(-) m6A 5'UTR//intron       24981863//27371828
chr2:219524256-219524257(-) m6A 5'UTR       24284625//24981863
chr2:219524261-219524262(-) m6A 5'UTR       24284625//24981863
chr2:219524270-219524271(-) m6A 5'UTR       24284625//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF142
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: ZNF142

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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