Detail Information

Basic Information:


  VIRBase ID:  

VHID00023025

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 IRF7
miRBase
Accession/Entrez ID		 zikv-mir-3 3665
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - IMD39//IRF-7//IRF-7H//IRF7A//IRF7B//IRF7C//IRF7H

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR IRF7
chr11:612604(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IRF7
chr11:613296-613297(-) m6A 3'UTR//CDS//exon//intron       -
chr11:613398-613399(-) m6A 3'UTR//CDS//exon       -
chr11:613426-613427(-) m6A 3'UTR//CDS//exon       -
chr11:613468-613469(-) m6A 3'UTR//CDS//exon       -
chr11:613489-613490(-) m6A 3'UTR//CDS//exon       -
chr11:613524-613525(-) m6A 3'UTR//CDS//exon       -
chr11:614067-614068(-) m6A exon//intron       27371828
chr11:614116-614117(-) m6A exon//intron       27371828
chr11:614513-614514(-) m6A CDS//exon       -
chr11:614518-614519(-) m6A CDS//exon       -
chr11:614849-614850(-) m6A 3'UTR//CDS//exon       -
chr11:614913-614914(-) m6A 5'UTR//CDS//exon       -
chr11:614937-614938(-) m6A 5'UTR//CDS//exon       -
chr11:615047-615048(-) m6A CDS//intron       -
chr11:615089-615090(-) m6A CDS//intron       -
chr11:615941-615942(-) m6A 5'UTR       24981863
chr11:615995-615996(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate IRF7
Chromatin K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: IRF7

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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