Detail Information

Basic Information:


  VIRBase ID:  

VHID00022998

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-3 IMPDH2
miRBase
Accession/Entrez ID		 zikv-mir-3 3615
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - IMPD2//IMPDH-II

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IMPDH2
chr3:49061985-49061986(-) Am CDS//exon       -
chr3:49062071-49062072(-) m6A exon//intron       22575960
chr3:49062121-49062122(-) m6A CDS//exon       22575960
chr3:49062184-49062185(-) m6A CDS//exon       22575960
chr3:49062836-49062837(-) m6A exon//intron       24284625//24981863//22608085
chr3:49064212-49064213(-) m6A CDS//exon       26404942
chr3:49064243-49064244(-) m6A CDS//exon       26404942//22575960
chr3:49064250-49064251(-) Am CDS//exon       -
chr3:49064253-49064254(-) Am CDS//exon       -
chr3:49064265-49064266(-) m6A CDS//exon       26404942//22575960
chr3:49064361-49064362(-) m6A exon//intron       24981863//26404942//22575960
chr3:49064460-49064461(-) m6A CDS//exon       26404942//22575960
chr3:49065163-49065164(-) m6A CDS//exon       26404942//22575960
chr3:49065188-49065189(-) m6A CDS//exon       26404942//22575960
chr3:49065236-49065237(-) m6A CDS//exon       22575960
chr3:49065323-49065324(-) m6A CDS//exon       22575960
chr3:49065517-49065518(-) m6A exon//intron       24284625//24981863
chr3:49065553-49065554(-) m6A exon//intron       24284625//24981863
chr3:49065696-49065697(-) Am CDS//exon//intron       -
chr3:49065900-49065901(-) m6A CDS//exon       -
chr3:49065925-49065926(-) m6A CDS//exon       -
chr3:49065963-49065964(-) m6A CDS//exon       -
chr3:49066027-49066028(-) m6A exon//intron       -
chr3:49066732-49066733(-) m6A CDS//exon       24284625//27773535//22575960
chr3:49066808-49066809(-) m6A 5'UTR//exon       24284625//27773535//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate IMPDH2
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-3
Interactor2: IMPDH2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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